Gene Rmet_3552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3552 
Symbol 
ID4040400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3851993 
End bp3852409 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content65% 
IMG OID637978969 
Productphenylacetic acid degradation-like protein 
Protein accessionYP_585693 
Protein GI94312483 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGAAT CCACTTTCAC GCTAGCCGAC ATCGACGCCA CGCTCGAACG CGTGCTGGCC 
CCCTGGGTGC GTGAGCTTGG CCTGCGTGCC GAAGCCGTCG ATGCCGATGG CGTGACACTG
CGTCTGCCTT TCAGCGAAAG CCTTCGCCAC GCCGGCGGCG TGGTGTGCGG GCAGGTGCTG
ATGTCCGCGG CGGACACGGC GATGATCGTC GCCATCGCGA ACGCCCTGGG CAATTTCCGC
CCGATGACGA CCGTCAGCCT CACCACCAAC TTCATGCGTC CCGTGATCGA CGGCGATGTG
CTTGTGCGCG CCAACGTGTT GCGGCTCGGC AAGACCGTGG TGTTCGGCGA GATCGAACTC
ACTGGCAAGG ACGGCAAGCT CGCCGTGCAG GCCACTACCA CCTACGCGCT GCTTTGA
 
Protein sequence
MPESTFTLAD IDATLERVLA PWVRELGLRA EAVDADGVTL RLPFSESLRH AGGVVCGQVL 
MSAADTAMIV AIANALGNFR PMTTVSLTTN FMRPVIDGDV LVRANVLRLG KTVVFGEIEL
TGKDGKLAVQ ATTTYALL