Gene Rmet_3545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3545 
Symbol 
ID4040393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3843361 
End bp3844542 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content65% 
IMG OID637978962 
ProductUMUC-like DNA-repair protein 
Protein accessionYP_585686 
Protein GI94312476 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCAT CCGCACGGCG CATCGCCCAT CTCGACATGG ATGCCTTCTA TGCGTCCGTC 
GAACTGTTGC GCTACCCGGA TCTGCGCGGC CAGGCCGTCG TGATCGGGGG CGGTCGCAAC
GCCGTGCCCG AGGACCTGCC CGACGGCACG CGCCGTTATG CGCGTCTGCG CGATTACGCC
GGACGCGGCG TCGTGACCAC GTCCACCTAC GAGGCCCGCG CGCTTGGCGT GTTTTCCGCC
ATGGGGATGA TGAAGGCCGC CAAGCTGGCA CCCGACGCGA TCCTGTTGCC GACGGACTTC
GACGCCTACC GGCGTTACTC CGGGTTGTTC AAGGCTGCAG TCAGATCATT CACCGAACAA
ATAGAAGACC GGGGAATCGA CGAGATATAT ATCGATCTGA CTGATATTGA TGGTGAGGCA
CGCGATGTGG CGGCCCGTAT CAAGGCCGCC GTGAACGCCG CCACCGGGCT GACCTGTTCG
ATCTGCGTGG CGCCAAACAA GCTGTTGGCC AAGATCGGTT CCGAACTCGA CAAGCCAGAC
GGCCTGACGA TCCTGACGCC GGCCGATATC CCGACACGAA TCTGGCCGCT GGCAGCCCGC
AAGGTCAATG GCATCGGCCC CAAGGCGGCG GAGAAGCTGG CGGCTATCGG CATCGAGACC
GTGGGGCAAC TGGCGGAGGC CGACATCGCG CTGCTGCAGG CCCATTTCGG CCGCAATTAC
GCAAGCTGGC TGGCCGAAGT GGCGAATGGG CGCGACGAGC GGCAGGTCGT GGTCAGCTCC
GAACCCAAGT CGATGAGCCG CGAAACCACG TTCGAGCGTG ATCTGCATCC GCGCGGCGAT
CGTCCGGTAC TGTCCGAGCA ATTCACCCGG CTTTGCATGC GCGTGGCCGA AGATCTGCGG
CGCAAGGGCT ACGTGGGGCG CACCGTCGGC ATCAAGCTGC GTTTCGACGA CTTCCACACC
GTTACGCGCG ACCTGACGCT GACCGCCCAC ACCGCGGACG GCGCGACGAT CCGGCATGGC
GCCACCGAGT GCCTCAAGCG TATCCCGCTG GAACGACGCA TCCGGCTGCT CGGCGTACGC
GTCAGCGCGC TGATCCCGGC CGCCGATCAG GGCGATGACC CCGCGCCGGT CCAGGAGGAA
TTGCGCTTCG ATGCCGAGCC GGATTCCCCG GTTTTCCGTT GA
 
Protein sequence
MSSSARRIAH LDMDAFYASV ELLRYPDLRG QAVVIGGGRN AVPEDLPDGT RRYARLRDYA 
GRGVVTTSTY EARALGVFSA MGMMKAAKLA PDAILLPTDF DAYRRYSGLF KAAVRSFTEQ
IEDRGIDEIY IDLTDIDGEA RDVAARIKAA VNAATGLTCS ICVAPNKLLA KIGSELDKPD
GLTILTPADI PTRIWPLAAR KVNGIGPKAA EKLAAIGIET VGQLAEADIA LLQAHFGRNY
ASWLAEVANG RDERQVVVSS EPKSMSRETT FERDLHPRGD RPVLSEQFTR LCMRVAEDLR
RKGYVGRTVG IKLRFDDFHT VTRDLTLTAH TADGATIRHG ATECLKRIPL ERRIRLLGVR
VSALIPAADQ GDDPAPVQEE LRFDAEPDSP VFR