Gene Rmet_3492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3492 
Symbol 
ID4040340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3782733 
End bp3783689 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content66% 
IMG OID637978909 
ProductAlpha/beta hydrolase fold-3 
Protein accessionYP_585633 
Protein GI94312423 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000681544 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.557466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCG ACCCCCAGCT ACTCAGCTAC TACCGCCAGA TGGCGGACCT GTACGCCAAC 
GAACCCATTC CCGAGGATGC CGCAGCGCGG CGCTCGCGCT TCGAGGATGT GGCCGCGCGC
TCGCGACAGC CGGACACCGA GGAGATCTCC GTCACCGATC TCGCGATCCC CGTGGACGGC
GCGGCGTTGA CGGTGCGCTT GTTCAGGCCC GCCAATGTTG AGCAGCCTCG ACTGATTGTC
TATTTCCACG GTGGTGGCTG GGTCGTCGGC TCGCCGGAAA CGCATCACAC GGTGGCGGCG
CTGCTGGCAG CCGACACACA GTGCGTCGTT GCCAGTGTCG ACTACAGGCT GGCCCCGGAA
TACGCGTTTC CAACCCCTTG CGACGATGCG GTGGCAGCCG TGCAATGGCT CGCTGCATCG
CGCGAGTCGC TTGGCGTGCA TCCAGATTTT CTCGCCGTGG CTGGCGACAG CGCAGGCGCG
CATCTGGCTG CGGCAGCGGC CCGCGTCGTC AACGAACAGC GCCGTGCGCA TATCGTCCAG
GCGCAGTTGC TGATCTACCC CGTGGCTGCG CCATTGCTCA CGACCGAGAG CTATCGGGCG
TTCGCGAACG GGCCTGGTCT CACCCGAGAC GAAATGGCGT GGTACTGGAC GCAGTTCATC
GGCGCCGAAG AACTGGCCAA GGGCGCCGAG CAGGACGATC CCCGGATCCA TCTGATGGCA
TCGCCGCCCG CCATGTTGCC CCCCGCCAGC GTCGTGCTTG TGGCGGCCAA TGACGTGCTG
CGTGATGACG GCCTGGCCTA CGCCAACTTC CTCGTGCGCC ACGATGCACC GGTGATCACG
ATCGAGGCGT CAGGTATGAC ACATGGCTTT GCGCGTCTGC AACCGGACGC ACCACGCGCA
CGGGAGTGGA TGCGCCGCGC CGCCGAGGCG TTCACAGGTG TGTTCGACGA CCTCTGA
 
Protein sequence
MAIDPQLLSY YRQMADLYAN EPIPEDAAAR RSRFEDVAAR SRQPDTEEIS VTDLAIPVDG 
AALTVRLFRP ANVEQPRLIV YFHGGGWVVG SPETHHTVAA LLAADTQCVV ASVDYRLAPE
YAFPTPCDDA VAAVQWLAAS RESLGVHPDF LAVAGDSAGA HLAAAAARVV NEQRRAHIVQ
AQLLIYPVAA PLLTTESYRA FANGPGLTRD EMAWYWTQFI GAEELAKGAE QDDPRIHLMA
SPPAMLPPAS VVLVAANDVL RDDGLAYANF LVRHDAPVIT IEASGMTHGF ARLQPDAPRA
REWMRRAAEA FTGVFDDL