| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3467 |
|---|
| Symbol | |
|---|
| ID | 4040312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3744390 |
|---|
| End bp | 3747584 |
|---|
| Gene Length | 3195 bp |
|---|
| Protein Length | 1064 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637978883 |
|---|
| Product | cytochrome P450 |
|---|
| Protein accession | YP_585608 |
|---|
| Protein GI | 94312398 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein)
[COG2124] Cytochrome P450 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACTG CAACACCTGC CGCTGCCCTC GAGCCGATTC CCCGCGATCC GGGCTGGCCG
ATCTTCGGCA ACCTGTTCCA GATCACGCCG GGCGAGGTCG GCCAGCATTT GCTGGCGCGT
AGCCGCCACC ACGATGGCAT CTTCGAACTC GACTTCGCCG GCAAGCGCGT GCCGTTCGTG
TCGTCGGTCG CGCTGGCCAG CGAGTTGTGC GACGCCACGC GCTTTCGCAA GATCATCGGG
CCACCGCTGT CCTACCTGCG CGACATGGCC GGCGACGGCC TGTTCACCGC GCACAGCGAC
GAGCCGAACT GGGGCTGCGC GCACCGCATT CTGATGCCGG CGTTCAGCCA GCGGGCGATG
AAAGCCTACT TCGACGTGAT GCTGCGTGTG GCTAACCGGC TGGTGGACAA ATGGGACCGA
CAGGGCCCGG ACGCCGATAT CGCCGTGGCG GACGACATGA CGCGCCTGAC GCTCGACACC
ATCGCGCTGG CGGGCTTCGG GTACGACTTC GCATCGTTTG CGAGTGACGA ACTCGATCCG
TTCGTGATGG CGATGGTCGG CGCGCTGGGG GAGGCGATGC AGAAGCTCAC GCGCCTGCCG
ATCCAGGATC GCTTCATGGG CCGCGCGCAT CGCCAGGCCG CCGAGGACAT CGCATACATG
CGCAATCTGG TCGATGACGT GATTCGCCAG CGGCGCGTGT CGCCAACGTC GGGCATGGAT
CTGCTGAACC TGATGCTCGA AGCGCGCGAT CCCGAGACCG ACCGGCGGCT CGACGACGCC
AACATCCGCA ATCAGGTCAT CACGTTCCTG ATTGCCGGCC ACGAAACCAC CAGCGGCTTG
CTCACGTTCG CGCTCTATGA ACTGCTGCGC AATCCGGGCG TGCTGGCGCA GGCGTATGCC
GAAGTCGACA CAGTGCTGCC CGGCGATGCG CTGCCGGTCT ATGCCGATCT GGCGCGTATG
CCCGTGCTCG ACCGCGTGCT GAAGGAAACG CTGCGGTTGT GGCCGACCGC ACCCGCCTTC
GCGGTGGCGC CGTTCGATGA CGTGGTGCTG GGCGGCCGCT ACCGGCTGCG CAAGGACCGT
CGCATCTCGG TGGTGCTGAC CGCGCTGCAT CGCGATCCGA AGGTCTGGGC GAACCCCGAG
CGTTTCGATA TCGACCGCTT CCTGCCCGAG AACGAGGCGA AGCTTCCCGC CCATGCCTAT
ATGCCATTTG GACAGGGCGA GCGCGCGTGC ATCGGCCGCC AGTTCGCGCT GACCGAAGCC
AAGCTCGCGC TGGCGCTGAT GTTGCGCAAC TTTGCGTTCC AGGACCCGCA CGACTACCAG
TTCCGGCTCA AGGAAACGTT GACGATCAAG CCCGATCAGT TCGTGCTGCG CGTGCGGCGA
CGCAGGCCAC ACGAGCGGTT CGTGACCCGG CAGGCATCGC AGGCCGTTGC CGACGCGGCG
CAGACAGACG TTCGCGGCCA TGGGCAGGCG ATGACCGTGC TGTGCGCATC GAGTCTCGGC
ACGGCTCGCG AACTGGCTGA GCAGATCCAT GCCGGCGCCA TTGCGGCGGG CTTCGACGCG
AAGCTGGCCG ACCTCGACGA CGCCGTAGGC GTCTTGCCCA CTTCGGGCCT GGTCGTCGTC
GTGGCCGCTA CCTACAACGG CCGCGCGCCC GATTCGGCTC GCAAATTCGA AGCGATGCTC
GACGCGGACG ATGCCAGTGG CTACCGCGCG AATGGAATGC GGCTGGCGCT GCTCGGCTGC
GGCAATTCGC AGTGGGCGAC GTACCAGGCG TTCCCACGTC GCGTGTTCGA TTTCTTTATT
ACCGCGGGTG CGGTGCCGCT GCTGCCGCGT GGCGAAGCCG ATGGCAATGG CGACTTCGAT
CAGGCGGCCG AGCGCTGGCT CGCGCAACTC TGGCAGGCGC TGCAGGCCGA CGGCGCGGGC
ACCGGTGGCC TCGGCGTGGA CGTGCAGGTG CGCAGCATGG CGGCAATCCG CGCTGAAACG
CTGCCAGCCG GCACGCAGGC GTTCACGGTG CTGTCAAACG ACGAACTGGT AGGCGACCCG
AGCGGCCTGT GGGATTTCTC GATCGAGGCG CCGCGCACGT CGACGCGCGA TATCCGGCTG
CAACTGCCTC CGGGCATCAC GTATCGCACC GGCGATCACA TCGCGGTGTG GCCGCAGAAC
GATGCGCAAC TCGTTTCCGA GTTGTGCGAG CGGCTCGATC TCGATCCCGA TGCGCAGGCC
ACGATCTCCG CACCACACGG CATGGGGCGT GGCCTGCCAA TCGACCAGGC GTTGCCGGTG
CGGCAACTGC TGACGCACTT CATTGAGCTG CAGGACGTGG TCTCGAGACA GACGCTGCGT
GCGTTGGCGC AGGCCACGCG CTGCCCTTTC ACAAAGCAGT CGATCGAACA ACTTGCTTCG
GACGACGCGG AGCATGGGTA CGCCACGAAG GTGGTCGCGC GGCGGCTGGG CATCCTCGAT
GTGCTGGTCG AACATCCGGC GATCGCGCTG ACGCTTCAGG AACTGCTGGC GTGTACTGTG
CCGATGCGGC CGCGCCTTTA CTCGATTGCA TCGTCGCCGC TGGTATCGCC CGATGTGGCG
ACGCTACTGG TCGGCACCGT CTGCGCGCCG GCGTTGTCCG GGCGCGGGCA GTTCCGTGGC
GTGGCGTCGA CGTGGCTCCA GCATCTGCCG CCCGGCGCGC GGGTATCCGC GTCGATTCGC
ACGCCGAATC CGCCGTTCGC CCCGGACCCC GACCCGGCGG CGCCAATGCT GCTGATCGGT
CCGGGCACCG GCATCGCGCC GTTCCGCGGA TTCCTGGAGG AACGCGCGTT GCGGAAGATG
GCGGGCAATG CGGTGACGCC GGCGCAGCTC TACTTCGGCT GCCGCCATCC GCAACATGAC
TGGCTCTATC GCGAGGACAT CGAACGCTGG GCCGGGCAGG GTGTGGTGGA GGTTCACCCG
GCGTACTCAG TCGTGCCGGA TGCACCGCGC TATGTGCAGG ATCTGCTCTG GCAGCGGCGC
GAGCAGGTCT GGGCGCAGGT ACGGGACGGC GCGACGATCT ACGTCTGCGG CGATGGCCGC
CGCATGGCGC CAGCGGTACG CCAGACACTG ATCGAGATCG GCATGGCGCA GGGTGGCATG
ACCGATAAGG CGGCGTCCGA CTGGTTTGGC GGTCTCGTCG CGCAGGGCCG CTATCGGCAG
GATGTCTTCA ACTGA
|
|---|
| Protein sequence | MSTATPAAAL EPIPRDPGWP IFGNLFQITP GEVGQHLLAR SRHHDGIFEL DFAGKRVPFV
SSVALASELC DATRFRKIIG PPLSYLRDMA GDGLFTAHSD EPNWGCAHRI LMPAFSQRAM
KAYFDVMLRV ANRLVDKWDR QGPDADIAVA DDMTRLTLDT IALAGFGYDF ASFASDELDP
FVMAMVGALG EAMQKLTRLP IQDRFMGRAH RQAAEDIAYM RNLVDDVIRQ RRVSPTSGMD
LLNLMLEARD PETDRRLDDA NIRNQVITFL IAGHETTSGL LTFALYELLR NPGVLAQAYA
EVDTVLPGDA LPVYADLARM PVLDRVLKET LRLWPTAPAF AVAPFDDVVL GGRYRLRKDR
RISVVLTALH RDPKVWANPE RFDIDRFLPE NEAKLPAHAY MPFGQGERAC IGRQFALTEA
KLALALMLRN FAFQDPHDYQ FRLKETLTIK PDQFVLRVRR RRPHERFVTR QASQAVADAA
QTDVRGHGQA MTVLCASSLG TARELAEQIH AGAIAAGFDA KLADLDDAVG VLPTSGLVVV
VAATYNGRAP DSARKFEAML DADDASGYRA NGMRLALLGC GNSQWATYQA FPRRVFDFFI
TAGAVPLLPR GEADGNGDFD QAAERWLAQL WQALQADGAG TGGLGVDVQV RSMAAIRAET
LPAGTQAFTV LSNDELVGDP SGLWDFSIEA PRTSTRDIRL QLPPGITYRT GDHIAVWPQN
DAQLVSELCE RLDLDPDAQA TISAPHGMGR GLPIDQALPV RQLLTHFIEL QDVVSRQTLR
ALAQATRCPF TKQSIEQLAS DDAEHGYATK VVARRLGILD VLVEHPAIAL TLQELLACTV
PMRPRLYSIA SSPLVSPDVA TLLVGTVCAP ALSGRGQFRG VASTWLQHLP PGARVSASIR
TPNPPFAPDP DPAAPMLLIG PGTGIAPFRG FLEERALRKM AGNAVTPAQL YFGCRHPQHD
WLYREDIERW AGQGVVEVHP AYSVVPDAPR YVQDLLWQRR EQVWAQVRDG ATIYVCGDGR
RMAPAVRQTL IEIGMAQGGM TDKAASDWFG GLVAQGRYRQ DVFN
|
|---|
| |