| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3442 |
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| Symbol | |
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| ID | 4040287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3716055 |
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| End bp | 3717323 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637978858 |
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| Product | acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_585583 |
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| Protein GI | 94312373 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAC GAGACAACAT GAATCCCGTT GAAACCACGC TGACGCAATA TATCGACCAA
CACCGCCCGC AACAGGAAGC GTTCCTGGCC GAGCTGGTCA AGGTGCCGTC GGACAACCCC
CCCGGCGATT GCGACGCCCA TGGCAAGCGC GCCAAGGAAC TGCTCGAAGG GCTGGGATTC
AAGGTCGAGG CCCACAAGGT GCCCGAAGAC AAGGTCCGTG CAGCCGGCAT GATCAGCGCG
ACCAACCTGC TGGTGCGCAA GACGTTCGGC AACGGTGGAC CGACCATCGC GATGAACGCC
CACGGTGACG TGGTGCCTCC GGGCCTGGGC TGGACCAAGG ACCCGTACGG CGGCGAGATC
GCTGACAGCG AACATGGCCC GGTGATGTTC GGCCGTGGCG TGGCCGTGTC GAAGTCGGAC
TTCGCCACCT ACGCCTACGC CGTGCTGGCG CTTCAGGAAG CCGAGAAGCA GGGCGCGAAG
CTGAACGGCA CCGTCGAACT GCAGTTCACC TATGACGAGG AAACCGGTGG CGACATCGGT
CCGAAGTTCC TGCTCGACGA AGGCCTGACC AAGCCCGATT ACGCAATCTC GGCCGGCTTC
TCGTACGGCA TCACGTCGGC CCACAACGGC TGTCTGCACG TGGAAGTCAC CGTCAAGGGC
AAGCAGGGCC ACGCCGCCAT GCCGCACACT GGCGTGGACG CGATCGAGGC CGCCACGCAC
ATCCTGCAGG CGATCTACGG CCTGCGGGCC GAACTGGCCA CGCGCAAGAG CAAGGTGCTC
GGCATCGACA CTGCCACGCT GAACGTCGGC CTGATCAAGG GTGGCATCAA CACCAACGTG
GTGCCTGACC TGGTCACGTT CCGCGTGGAC CGCCGCATGA TTCCGGAAGA GATCGGTTTC
GACGCCGAAG GCGAGCTCCG CGCTGTCGTG GAGAAGGCCG CCAAGGAGCG TCCGGGCATC
GAGGTGAAGG TAGAGCGCAT CATCCTGGCC GAACCGCTGT CGGAACTGCC GGGCGTGGAG
AAGCTGATCG GTGCCCTGAA GCAACGCGCC GAGTCGGTCT TCGGCGTGGA GATTCCGGTG
CAGGGCGTGC CGCTCTACAC CGACGCTCGC CACTACACGA GCCGTGGCAT CCCGACCGTG
CTGTACGGCG CCGGCCCGCG CACGCTGATG GAAGCCCGCG GCCACAACTC GGACGAGAAC
CTGCGTCTGA ACGACCTGAA CCGTGCCACC AAGGTCGTCG CGCTGGCACT GTCGGACCTG
ATGGCCTGA
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| Protein sequence | MTARDNMNPV ETTLTQYIDQ HRPQQEAFLA ELVKVPSDNP PGDCDAHGKR AKELLEGLGF
KVEAHKVPED KVRAAGMISA TNLLVRKTFG NGGPTIAMNA HGDVVPPGLG WTKDPYGGEI
ADSEHGPVMF GRGVAVSKSD FATYAYAVLA LQEAEKQGAK LNGTVELQFT YDEETGGDIG
PKFLLDEGLT KPDYAISAGF SYGITSAHNG CLHVEVTVKG KQGHAAMPHT GVDAIEAATH
ILQAIYGLRA ELATRKSKVL GIDTATLNVG LIKGGINTNV VPDLVTFRVD RRMIPEEIGF
DAEGELRAVV EKAAKERPGI EVKVERIILA EPLSELPGVE KLIGALKQRA ESVFGVEIPV
QGVPLYTDAR HYTSRGIPTV LYGAGPRTLM EARGHNSDEN LRLNDLNRAT KVVALALSDL
MA
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