Gene Rmet_3410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3410 
Symbol 
ID4040254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3688900 
End bp3689889 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content68% 
IMG OID637978825 
Producthypothetical protein 
Protein accessionYP_585551 
Protein GI94312341 
COG category 
COG ID 
TIGRFAM ID[TIGR03476] putative membrane protein 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCT TCGCCCTGCT GGGTGCACTG GCTGGTTTGC TGATCCTGAC GGTTGTCGTG 
GCCACGGAAG GCATTGCCGA AGTGGCACAC ATCCTCGAGC AGGCCGGATG GCCGCTGCTG
TGGCTGGTGC CGATCCACCT CATCGCGCTC TGGTTTGACG CCTATGGCTG GCGCGTGCTG
CTCGCGCCGG CCGATCCCGA GAAACGCGCT GGCACGGGCT TCCTGCTCTG GGTGGCGACG
GTGCGCGAAG CCGTGACCCG GCTGCTGCCC ACGGCCGGCA TCGGCGGCGA ACTCGTCGGT
ATCCGCCTCG CGTGGCGGCG CGTGCCAGAT GGTACGGCGG TCTCGGCAAG CATCGTCATC
GAGGTGATGG TGACGATGTT CTCGCACTAC CTGTTCGCAC TAGCCGGGGT GCTGCTGCTG
ATGTCGATCA CGCAGGACAG CGACCACGGC CTGCTGGTGG CCATCGGCCT GCTGCTGTCA
CTGCCGATCC CCGCACTATT CGCCTACGCA CTGCGCCACG GCGCATGGTT CACCCGACTC
GAATCGTTCG CGCAGCGGAT GCTCGGCGAC GACCACAAGC TCGCCGCGCT GATCGACGGC
GCCCGCCTCG ACGCGCAGAT TCGCGCGCTG TGCCGCCACT ACGGCGTGCT GGTGCGCACG
CTGATCTGGC AGATGACCGG GCTCGTCGTC GGCACGCTCG AAGTCTGGTG GGGACTATCG
CTGCTCGGCC ACCCGGTGGG CTTCGGCGAG GCATTGGCCA TCGAAGCCCT GACACTCGCC
GCACGCCAGG TGGCGTTCTT CATCCCGGCG GGGCTGGGGG TGCAGGAGGC GGTGATCGTG
CTGCTGGGCA CCAGCTTCGG CATCGACCCG CAGACCTCGC TCGCGCTCGC GCTGGTCAAG
CGCGCGCGCG AAGTCCTGTT CGGGGTACCG GCGCTGTTGT CTTGGCAGTG GGTGGAGTGG
CGGCAGATGC GGCGGCGGGT CGCCGGTTGA
 
Protein sequence
MKRFALLGAL AGLLILTVVV ATEGIAEVAH ILEQAGWPLL WLVPIHLIAL WFDAYGWRVL 
LAPADPEKRA GTGFLLWVAT VREAVTRLLP TAGIGGELVG IRLAWRRVPD GTAVSASIVI
EVMVTMFSHY LFALAGVLLL MSITQDSDHG LLVAIGLLLS LPIPALFAYA LRHGAWFTRL
ESFAQRMLGD DHKLAALIDG ARLDAQIRAL CRHYGVLVRT LIWQMTGLVV GTLEVWWGLS
LLGHPVGFGE ALAIEALTLA ARQVAFFIPA GLGVQEAVIV LLGTSFGIDP QTSLALALVK
RAREVLFGVP ALLSWQWVEW RQMRRRVAG