Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3389 |
Symbol | |
ID | 4040233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 3662440 |
End bp | 3663969 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637978804 |
Product | general secretion pathway L |
Protein accession | YP_585530 |
Protein GI | 94312320 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTACCA CCCTCTACGT CCGCCTGCCG CATCGGCCGC ACGATCAGCC GCAACCGTGG CAGTTCGGCG CCATGCCATT TGCGCTGGTA CGCACGCCCG TAGGGGATAA GAATCGCCGC CAGGCGGCCG AACAGGCACC CGAGCTGTTG CGCGAAGGCC ACGCCGTGCC GTCCGAGATG CCGCCGGCAG ACCGCCTGGT GCTGATCGTG GCCGCCAGCG ATGTCCTGCT GACGGCGGCC ATGGTCCCGC CTCTGCCGCC AGTACGGATG CGCCTCGCGC TACCGAACCT CGTGGAGGAC GTGCTGGCCA CCGACGCCGC TCCATGCCAT ATCGCCCTGG GGCCGGCATT CGATGGCGCC GGTTCAGCAC GTGGCCCGCG CCGCCGCTTG CTGATGGTGA CCGACCGCGC CTGGATGCGC GCAGCGCTCG ACCAGTTCGC AGAACACAAG CATCGCCGCC GCCATGTGGT GGCCGCCCAG CTTTGCCTGC CGCTCGCGGC CCCAGTCACG GCCCCCGAAC CGGCGCCAGA GCCGGAACCG GCGCTGGCCA CCGCGGATGG TCCCGTATCT CCGGCCCGCG CCGCTGCGCA GTCGGCGCCA ACGGAAGTGG GCACGGTCGA TACCAGTCCG GAACAACCCG CCACGCTGGT CGTGGAAGCC GCCACCTCCA CACTCGCGCA ATCAGCGCTG TTGCTCGACA CCGCGGCACC TGCGCCGGGC GAACTGTCGC GCCTGTGGCA ATTGACTGTG CGCACCGGCC CGTACGAGGG CTACGGTCTG CTGCTCGATG ACCGTGCGCT GTCGACATGG CAGCTCCTGG CGCCGGCCGG TCAATGGCAT GGCGACAACG CGGCCCTGGC GAACGCGCCA GTACCGGCGC TACAAGGCAA GCGTCCGCCG ATGCACGCAT CGCGTGCCTC CGAGACCTGG CGCATCTGGC TGGCTGGTAT CGAGGAATGC CTGCAGCAGC CGCAGCTCGA TCTGGCGCAG TTCGAATTCG CCCAAGGGCG CATGGACCGC TGGAACGTGC GCGCATGGCG CTGGCCGGCC CTGCTGGTCG TCGCGCTCCT GCTCGTGCAG ATCGTCGGCA TGAACGTGCA ATGGCTGACG CTTCGCAAGG AAGCCAAGCG TCTGGAGGCG GCTCAGGTCG ATCTGCTGCA CACAGCATTT CCGAACGTGC CGCCGGTAGC CGAGCCCATT CTGCTGATGC GCCGCCAGGT GGAGCAATTG CGCACGGCCA GCGGTCGCAG CACACCCAAC GATTTCCTGC CGCTCGCCGA CGGCTTTGCG CGCGCCGCGC GCGATCTGCC GCCCGATGCG CTGCTCCAGC TCGAATACCG CGCCGCGACG CTCTACGTGA CGCTCAAGCC CGGCACCAAC ACCTCCGCAC TGCAGAACGC CGTGCGCCAG GCCGGTCTGC AGATGGATGA AGACAGAAGC CCGCCCGATG CGGCGAGCCG CAGCGGGGGC GCCCCGGCGC CGACCGGTTC GCACTGGACC GTGAAGGCGG AAGGCGGGAC GGCATCATGA
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Protein sequence | MSTTLYVRLP HRPHDQPQPW QFGAMPFALV RTPVGDKNRR QAAEQAPELL REGHAVPSEM PPADRLVLIV AASDVLLTAA MVPPLPPVRM RLALPNLVED VLATDAAPCH IALGPAFDGA GSARGPRRRL LMVTDRAWMR AALDQFAEHK HRRRHVVAAQ LCLPLAAPVT APEPAPEPEP ALATADGPVS PARAAAQSAP TEVGTVDTSP EQPATLVVEA ATSTLAQSAL LLDTAAPAPG ELSRLWQLTV RTGPYEGYGL LLDDRALSTW QLLAPAGQWH GDNAALANAP VPALQGKRPP MHASRASETW RIWLAGIEEC LQQPQLDLAQ FEFAQGRMDR WNVRAWRWPA LLVVALLLVQ IVGMNVQWLT LRKEAKRLEA AQVDLLHTAF PNVPPVAEPI LLMRRQVEQL RTASGRSTPN DFLPLADGFA RAARDLPPDA LLQLEYRAAT LYVTLKPGTN TSALQNAVRQ AGLQMDEDRS PPDAASRSGG APAPTGSHWT VKAEGGTAS
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