Gene Rmet_3156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3156 
Symbol 
ID4039985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3420042 
End bp3420971 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content66% 
IMG OID637978556 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_585297 
Protein GI94312087 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACTT CGACCGTACC GCAAAACGCG GCCAAGGCGG CCGGTACCGC CAAAGAGCAG 
ACGCCGTTCC GCCGCTTCGC CAGGCAGTTC ATGGAAAGCA AGCTCGCGAT GATGGGGCTG
GTCATCCTTG GGCTGATCAT CCTGATCGCG ATATTCGCGC CGTGGCTCGC GCCACAGAAT
CCCTATGACC TCGCGACCCT GGACGTGCTC GACGCCCGCC TGGCCCCCGG CGAGCAGGCG
GGCAGTGGCA TGACGTTCCT GCTGGGCTCC GACGAACAGG GCCGCGACAT GCTTTCCGCG
GTGATGTACG GCCTGCGCAT CAGCGTGGGC GTCGGGGTGG TCAGCACCGT GATCGCGTTG
CTGCTGGGCG CCACGCTCGG CCTGCTGGCG GGCTTCATCG GCGGCCGCAC CGAGGCTTTC
ATCATGCGCG TGGCCGACCT GCAGCTTTCG TTTCCGCCGA TCCTGCTGGC GCTGATCCTG
CTGGCGTTCC TGCGTCCCGG CATCGGCAAC ATCGTCATCG CGCTGGTGGC CGTGCAGTGG
GCCTACTACG CGCGCACCAC GCGTAGCGCG GCGCTGGTCG AGCGGCGCAA GGAATATATC
GAGGCGGCCA CCTGCCTGGG CCTGCCGCCG GGGCGCATCA TGTTCCGCCA CCTGCTGCCG
AACTGCCTGC CGCCGCTGAT CGTCATCGCC GCGCTGCAAG TGGCGTCGGC CATCACGCTG
GAAGCCACGC TGTCGTTCCT GGGGCTCGGT GTGCCGGTTA CCGAGCCGTC GCTTGGGATG
CTGATTGCCA ATGGCCAGCA GTACATGCTG TCCGGCAAGT ACTGGATCAG CTTCTTCCCG
GGCATCGCCC TCGTGATCAC GATCGTGGCG ATGAACCTCG TGGCCGACCA GTTGCGCGAT
GTGCTCAATC CGCGCCTGCA AACGCAATAA
 
Protein sequence
MSTSTVPQNA AKAAGTAKEQ TPFRRFARQF MESKLAMMGL VILGLIILIA IFAPWLAPQN 
PYDLATLDVL DARLAPGEQA GSGMTFLLGS DEQGRDMLSA VMYGLRISVG VGVVSTVIAL
LLGATLGLLA GFIGGRTEAF IMRVADLQLS FPPILLALIL LAFLRPGIGN IVIALVAVQW
AYYARTTRSA ALVERRKEYI EAATCLGLPP GRIMFRHLLP NCLPPLIVIA ALQVASAITL
EATLSFLGLG VPVTEPSLGM LIANGQQYML SGKYWISFFP GIALVITIVA MNLVADQLRD
VLNPRLQTQ