| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3099 |
|---|
| Symbol | |
|---|
| ID | 4039927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 3358236 |
|---|
| End bp | 3358991 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637978498 |
|---|
| Product | lytic transglycosylase, catalytic |
|---|
| Protein accession | YP_585240 |
|---|
| Protein GI | 94312030 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCC CCGACCTGCC GACGCGCAAC CGCTGGTCCG CCTGGGCTGG CGGTTTGCTG
TGCGCGACGC TGATTGCGAA CGCCCATGCC GGCGCGCAGA AGGAGGAGGC GCTTGCCGAC
TCCGTGCGCG GGGCATTGGC GGCCGCGATC GCCGACAACA GGCCGGTGCG TCCGGCCTTC
GCGTCCGGGT CGGAGCGCCT TGGCTACCTG AAATGGCTCG GCGAGATGTC GCGCCGGCTG
GAAGCCCGGA TTCCCGAGCC GCAGGTACGC GTCGAGCTGA TCGAAACCGT CTACTACGAA
TCCAAGCGCG CCGGCCTGGA GCCGTCGCTA GTGCTTGGGC TCGTGCAGGT GGAAAGCAAC
TTCCGCAAAT ATGCGATCAG TTCGGCCGAT GCGCGCGGAC TGATGCAGGT GATGCCGTTC
TGGGTGCGCA GCATCGGTGA TGGCGACACG CGCAAGCTGT TCCATCTGCA GAGCAACCTG
CGCTATGGCT GCACGATCCT GCGTCATTAT CTCGATCGCG AGAACGGTGA CCTGTTCCTG
GCGCTGGGTC GCTACAACGG CAGCCGCGGG CGCCCCGAGT ATCCAAACGC GGTGCTGGCG
GCATGGAAGC GCTGGCAGTA TTCCGAGGCG ACCGTGACCA TCGCGGGGGA TCCGGATCCC
GCCGCGGTCA CCCCGGCACC CGTGCGACGC GCGGTGCCGC CGGAGTCGCC CGCCCGCAAT
CCGTTCTCGC CGCAACGTCT TGCCAATCCG TCATGA
|
|---|
| Protein sequence | MRIPDLPTRN RWSAWAGGLL CATLIANAHA GAQKEEALAD SVRGALAAAI ADNRPVRPAF
ASGSERLGYL KWLGEMSRRL EARIPEPQVR VELIETVYYE SKRAGLEPSL VLGLVQVESN
FRKYAISSAD ARGLMQVMPF WVRSIGDGDT RKLFHLQSNL RYGCTILRHY LDRENGDLFL
ALGRYNGSRG RPEYPNAVLA AWKRWQYSEA TVTIAGDPDP AAVTPAPVRR AVPPESPARN
PFSPQRLANP S
|
|---|
| |