Gene Rmet_3085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3085 
Symbol 
ID4039913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3340049 
End bp3341011 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content69% 
IMG OID637978484 
Productzinc-binding alcohol dehydrogenase 
Protein accessionYP_585226 
Protein GI94312016 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCG TAGTCCAGCA CCAATTCGGC GAAACGCCGT GTTTCACCAC CTTTGACGAC 
CCCTATCCGA GCGATGGGGA AACCCTGGTC CAGGTCAGGG CCGCAGTGAT CTGCCCGGCC
GATCTCGCTA TCGCCAAGGG GCTGCATCCC CGCTTGCCGA CGCAGTTGCC GTTCATCTGT
GGGCGCGATG GCGTCGGGCG GCTCGCCGAC GGGCAGCGTG TCTACTTCCG GGCCAGTCGG
GCGCCGTATG GCGCGATGGC CGAATACGCG CCGGCCGAGT GGGTGGCGCC GCTGCCGGAC
GATGTTGGTT GGGCGGCGGC TGCGGCGCTG GTCGGGCCTG CGCTGGCCGC ATGGTTGCCG
CTGGCGACGC GGGCCGATGT CGAGCCTGGC GAAACCGTGC TGGTGCTTGG CGCGTCGGGC
ATCGCGGGCC GCCTGGCGGT GCAGGCGGCG CGTCTGCAAG GGGCGGGGCG CGTCATCGCC
GCCGGTCATC TGCCCGAGCA GTTGTCCACA CTCGGTGCCG ATGCGCTGAT CGACCTCGCA
CTGCCGCCGA GCATCCTGCA GTACACGTTC GCCTCGTTTG CGGAGCAGGG GATCGACGTG
GTGATCGATT TCGTCTGGGG CGAGGCGCTA GAACTGCTGC TGGCCGCGTT GGTGCAGTGC
GACGGGATGC CGATGTCGAT GTTCGACCGT GGCGTGCGCA TCGTCACGAC GGCGAACCGA
GGGGCCGGCA GCATGATGCT GCCGCCTGCG GCGCTGCGCG ACTCGCGCGT GCAGCTCATG
GGCTGCGGCC CGGCCAACCA TCCGCCGCTC GGCTACATGA AGACGCTGGT CGACGACATC
CTTGCCTGCG CCAGTGATAG CGACCTCGGC ACGGAATTCG AACTGGCGCA GATGTCCGCG
GTCGCGGACG TTTGGCGGCG CGCTGGCGAG CAGGCTACGC GCGTCGTGCT GACACTCGAT
TGA
 
Protein sequence
MKAVVQHQFG ETPCFTTFDD PYPSDGETLV QVRAAVICPA DLAIAKGLHP RLPTQLPFIC 
GRDGVGRLAD GQRVYFRASR APYGAMAEYA PAEWVAPLPD DVGWAAAAAL VGPALAAWLP
LATRADVEPG ETVLVLGASG IAGRLAVQAA RLQGAGRVIA AGHLPEQLST LGADALIDLA
LPPSILQYTF ASFAEQGIDV VIDFVWGEAL ELLLAALVQC DGMPMSMFDR GVRIVTTANR
GAGSMMLPPA ALRDSRVQLM GCGPANHPPL GYMKTLVDDI LACASDSDLG TEFELAQMSA
VADVWRRAGE QATRVVLTLD