| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3055 |
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| Symbol | |
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| ID | 4039883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3311718 |
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| End bp | 3312704 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637978454 |
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| Product | TonB-like protein |
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| Protein accession | YP_585196 |
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| Protein GI | 94311986 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.719984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGGCG TTTCGATCGA TTCCTGCCGC CGTCCGCCCA TCCCAATCGT GAACGCCGTC
CTTCCTGCTC CCCGTCTCCC GCGCCATCCG CGCGAATGGT GGCAATCCAG CAGCACGCTG
ACCAAGGCCC TGGCCATCTC CGTGGCCGTG CACGCGCTGT TGCTGATGGT GCGGGTTGCA
GCGCCCGAGG TGTTCGAGAT CAAGCGTTCC GACCCGCAGC TCGACGTCGT GCTGGTCAAT
TCGAAATCGG CTGTGAAGCC GCGCAATCCG ACCGTGCTGG CGCAGGCCAA TCTCGACGGT
GGCGGCGAGC ATGACGCCCA GCGCGCTACC ACGCCGCTGC CCGCGCAGAC CGAATCGAAG
GAGGGCGACC TCATCAAGAT GACGCAGCGG CGCGTCGAGC AACTCGAGGA AGAGCAGCGC
CGGCTGATGA CGCAATCGCG CGAGGCGGCG CCCGCTGTGC GCAGCCAGCC GGTCAAGCCA
GGCGAGCAGC GCTCCGACCA GCCCACGCGC GGCCAGGACG ACCGCACGTC AAACGATGAA
ATGGCCCGGC TCGAAGCCGA GATCGGCCGT AATCTCGAGC ACTACGCCAA GCGCCCGAAG
CGGATGCAGC TGACCGCGAC CAGCGCACAG GGCGTTGACT ACGCACAGTA TTACGACCGC
CTGCGCCGCA AGATCGAGAC GCGGGGCACG AGCGATTTCC CGCAGCGCAA TGGTAAGCCG
ATCTATGGGC AACTGATCCT CGTGATCAAC GTGAATCGCC AGGGCAAGCT TGGCTACAAC
CGCGACGGCT ACAACGTCGA GGCCATCGAC GTGGCCAAGA GCTCCGGCGA CCCGGCGCTC
GACCGCCAGG CCGTGGCCAT TGTGCGTGCG GCCGCGCCGT TCGGGGCGTT CACGGCGGAG
ATGCAGGCGA AGCAGGATAT CCTCGAAGTC GTTTCCACTT TCAAGTTCAC CCGCAGCGGG
CTCGATGTCC GCCTGCAAGG CCGCTGA
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| Protein sequence | MAGVSIDSCR RPPIPIVNAV LPAPRLPRHP REWWQSSSTL TKALAISVAV HALLLMVRVA
APEVFEIKRS DPQLDVVLVN SKSAVKPRNP TVLAQANLDG GGEHDAQRAT TPLPAQTESK
EGDLIKMTQR RVEQLEEEQR RLMTQSREAA PAVRSQPVKP GEQRSDQPTR GQDDRTSNDE
MARLEAEIGR NLEHYAKRPK RMQLTATSAQ GVDYAQYYDR LRRKIETRGT SDFPQRNGKP
IYGQLILVIN VNRQGKLGYN RDGYNVEAID VAKSSGDPAL DRQAVAIVRA AAPFGAFTAE
MQAKQDILEV VSTFKFTRSG LDVRLQGR
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