Gene Rmet_3039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3039 
Symbol 
ID4039867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3293011 
End bp3293817 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content57% 
IMG OID637978438 
Productbeta-lactamase-like protein 
Protein accessionYP_585180 
Protein GI94311970 
COG category[R] General function prediction only 
COG ID[COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.357616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACT ACTTCGAGAT CGACTTTCTT GGCGTCGAAA CAGCGAAAAG CGGGGACGCG 
ATCACGCTGC GCTACTCGGT GAATGGCACC GAGGGCGTGC ACGTTGTTGA CGGTGGGTAT
CTGGATACGG GTGATCAGAT AGTCGAGCAT CTGAAGACGT ACTATGGAAC AACAGTCATC
GACCATGTGA TCCTCACGCA CCCAGATCGC GATCACGCCA ACGGACTACG AAAAGTCCTG
GAGCAATGCA CGGTCAGGAA TCTTTGGATC AACCGGCCGT GGATATACGC GGACCAGTTG
ATCGATCGCT TTGAGACCTA TGAATCGGTT GAAGCCCTGC GACGGAAGTT GCGCTCAATC
TACGATGCCA CGGCAATTCT TGAGGATATT GCGGTGGAGA AGGGAATTCC AATCCATGCC
CCCCTTCAGG GGCAGAGCAT CGGTCCGTTC GCGGTCATGG CACCTACCCT GGGGCGCTAC
TTGGACCTGA TCGTGGACTC CGCGAAGACA CCGGAAGCTG TCGAAGAAAG TGCTTTTGAT
AGCGCGCTGA GCAGCATATT CCGGGCAGTG AAGGCCGCGA CCGCCTACAT CAAGTCCCTG
TGGGGCGAGG AATATTTCCC GCCTGAGCCG ACCAGTCGTG AGAATGAAAT GAGTGTGGTG
CAGTCGGCTG TCTTGAACGG TCATCGCGTC ATGCTTACTG GCGATGCCGG GCGTGAAGCA
CTGCAGGAGG TGATCGACTA CGCACCTTTC GTGGGACTCG CGCTGCCAGG TATTCGGTAT
TTCCAAGTGC CCCATCACGG CGGGTGA
 
Protein sequence
MADYFEIDFL GVETAKSGDA ITLRYSVNGT EGVHVVDGGY LDTGDQIVEH LKTYYGTTVI 
DHVILTHPDR DHANGLRKVL EQCTVRNLWI NRPWIYADQL IDRFETYESV EALRRKLRSI
YDATAILEDI AVEKGIPIHA PLQGQSIGPF AVMAPTLGRY LDLIVDSAKT PEAVEESAFD
SALSSIFRAV KAATAYIKSL WGEEYFPPEP TSRENEMSVV QSAVLNGHRV MLTGDAGREA
LQEVIDYAPF VGLALPGIRY FQVPHHGG