Gene Rmet_2817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2817 
Symbol 
ID4039644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3064686 
End bp3065459 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content68% 
IMG OID637978216 
Producthypothetical protein 
Protein accessionYP_584959 
Protein GI94311749 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTTG CCTATACCGT TTCCGGTCTG CTGGTAGGTC TCCTGGTCGG TCTGACCGGA 
GTCGGCGGGG GTTCGCTCAT GACGCCGCTG CTGACGCTGC TGTTCGGCTT CTCGCCGGCC
ACTGCGGTGG GCACTGACCT GGCGTTTGCC TCGATTACCA AGGGCTTCGG CACGCTGGCC
CACCGGGCGC ACGGCCATGT GCAGTGGCAG GTGGTGCGCC GCCTGTGCGT GGGCAGCCTG
CCGGCCGCCG TGGCCGCCAT CCTCGTGCTC AAGAGCGCGG GTGAACTCAA TGCGCAGTGG
CTCCACGCGA TCCGCGTGAC GATCGGTGTG TCGGTCCTGC TGACCGTGCT GTCGCTGCTG
TTCCGCAAGC AGATGCTGGC CTGGCTGGCG CGCAACCCGC GCTTCCAGCT CGAAGGCCGC
AAGCAGGTGG TGGCCACCGT GCTGGTGGGC GCCGTGATCG GCGTGCTGGT GACGGTGTCG
TCGATCGGTG CCGGCGCCGT GGGCGCGACG CTGATCCTGC TGCTGTATCC CCATATGAAA
CCGGCCGAAG TGGCCGGTAC CGATATCGCC TACGCCGTGC CGCTCACGGC CGTGGCAGGG
CTGGGCCACG TGTGGCTCGG CACGGTCGAC TGGAATTTGT TGCTGGCGCT GCTGGTGGGC
TCGATCCCCG GCATCTGGCT CGGTGCGCAA CTGTCGCGGG CACTGCCCGA GCGGATCGTG
CGCGCCGCAC TTGCCACGAC GCTGACGCTC GTGGCCATCA AGCTCGTTTC ATGA
 
Protein sequence
MSLAYTVSGL LVGLLVGLTG VGGGSLMTPL LTLLFGFSPA TAVGTDLAFA SITKGFGTLA 
HRAHGHVQWQ VVRRLCVGSL PAAVAAILVL KSAGELNAQW LHAIRVTIGV SVLLTVLSLL
FRKQMLAWLA RNPRFQLEGR KQVVATVLVG AVIGVLVTVS SIGAGAVGAT LILLLYPHMK
PAEVAGTDIA YAVPLTAVAG LGHVWLGTVD WNLLLALLVG SIPGIWLGAQ LSRALPERIV
RAALATTLTL VAIKLVS