Gene Rmet_2793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2793 
Symbol 
ID4039620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3039713 
End bp3040402 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content65% 
IMG OID637978192 
Producthypothetical protein 
Protein accessionYP_584935 
Protein GI94311725 
COG category[S] Function unknown 
COG ID[COG3471] Predicted periplasmic/secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.340358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC TGCTGGCTGC CTCGCTGCTG AGTACAACCG CCGCCATGGC CGCCGCCCAG 
ACGGTTGCAC CTCCCTCGGG TGTTCTGTCG CTGTCCGCGC AAGCCGCGAC CGAGGTGCCG
ACCGACGTCG TACACCTGAC CCTGGCTGCC GAACAGGAAG GCCCCGAGCC GACGGCCATC
TCCAATGCGC TGTCGTCGCG CACGCAGGCC GTGCTGGCAC AGGCCAAGCG CACGTCAGGC
GTGGAGGCCC AGTCGGGCGG CTTCACGATT CATCCGAATA CCGACCGCAA TGGCCGCATC
AGCACGTGGC GTGGCCGCTC GGAGGTGATC CTGAAGTCGA AGGATTTCGC CGCCGTGTCG
AAGCTGGCCG GCGAACTGGC CAGCCAGATG CAGGTGCAGA ACATCGCGTT CTCGCTGTCG
CGCGAGACAC GCCTGGCTGC CGAGCAAAAG CTCGCCGACC AGGCCGTGGC CGCGTTCCGC
GACAAGGCAC AGGCCACGAC AAAGCTGTTC GGCTATAGCG GCTACACGAT CCGCGAAGTC
TCGCTGAACG AATCCGGCGG TGTCATGCCG ATGCCGCGCA TGTATGTCGC GAAGGCCATG
TCGGATAGCG CTGGCGCGCC GATTCCGGTG GAAGGTGGCA AGAGCCAGGT CACGGTTTCC
GTGAACGGCT CGGTGCAGAT GGTGAAGTAA
 
Protein sequence
MKKLLAASLL STTAAMAAAQ TVAPPSGVLS LSAQAATEVP TDVVHLTLAA EQEGPEPTAI 
SNALSSRTQA VLAQAKRTSG VEAQSGGFTI HPNTDRNGRI STWRGRSEVI LKSKDFAAVS
KLAGELASQM QVQNIAFSLS RETRLAAEQK LADQAVAAFR DKAQATTKLF GYSGYTIREV
SLNESGGVMP MPRMYVAKAM SDSAGAPIPV EGGKSQVTVS VNGSVQMVK