Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_2793 |
Symbol | |
ID | 4039620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 3039713 |
End bp | 3040402 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637978192 |
Product | hypothetical protein |
Protein accession | YP_584935 |
Protein GI | 94311725 |
COG category | [S] Function unknown |
COG ID | [COG3471] Predicted periplasmic/secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.340358 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAC TGCTGGCTGC CTCGCTGCTG AGTACAACCG CCGCCATGGC CGCCGCCCAG ACGGTTGCAC CTCCCTCGGG TGTTCTGTCG CTGTCCGCGC AAGCCGCGAC CGAGGTGCCG ACCGACGTCG TACACCTGAC CCTGGCTGCC GAACAGGAAG GCCCCGAGCC GACGGCCATC TCCAATGCGC TGTCGTCGCG CACGCAGGCC GTGCTGGCAC AGGCCAAGCG CACGTCAGGC GTGGAGGCCC AGTCGGGCGG CTTCACGATT CATCCGAATA CCGACCGCAA TGGCCGCATC AGCACGTGGC GTGGCCGCTC GGAGGTGATC CTGAAGTCGA AGGATTTCGC CGCCGTGTCG AAGCTGGCCG GCGAACTGGC CAGCCAGATG CAGGTGCAGA ACATCGCGTT CTCGCTGTCG CGCGAGACAC GCCTGGCTGC CGAGCAAAAG CTCGCCGACC AGGCCGTGGC CGCGTTCCGC GACAAGGCAC AGGCCACGAC AAAGCTGTTC GGCTATAGCG GCTACACGAT CCGCGAAGTC TCGCTGAACG AATCCGGCGG TGTCATGCCG ATGCCGCGCA TGTATGTCGC GAAGGCCATG TCGGATAGCG CTGGCGCGCC GATTCCGGTG GAAGGTGGCA AGAGCCAGGT CACGGTTTCC GTGAACGGCT CGGTGCAGAT GGTGAAGTAA
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Protein sequence | MKKLLAASLL STTAAMAAAQ TVAPPSGVLS LSAQAATEVP TDVVHLTLAA EQEGPEPTAI SNALSSRTQA VLAQAKRTSG VEAQSGGFTI HPNTDRNGRI STWRGRSEVI LKSKDFAAVS KLAGELASQM QVQNIAFSLS RETRLAAEQK LADQAVAAFR DKAQATTKLF GYSGYTIREV SLNESGGVMP MPRMYVAKAM SDSAGAPIPV EGGKSQVTVS VNGSVQMVK
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