Gene Rmet_2788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2788 
Symbol 
ID4039614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3034192 
End bp3035199 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content69% 
IMG OID637978187 
Producttransport system permease protein 
Protein accessionYP_584930 
Protein GI94311720 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.890347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGC TGCGGCGCGC GCTGATCGTC TGGGGTGTCC TCGCGCTGGC AGGGCTGGCC 
GTCTTCGGCC TGTCGCTGGC GATCGGCAGC GTGTCGCTCG ATGCCGGGCA ACTCTGGCAG
GCGCTGAGCG GCGCGGACGA TGGCACCGCA GGCGCCATCG TCCGCGAACT ACGGCTGCCA
CGTGCCGCCG CCGCGTTTGC CTGTGGCGGG CTGCTGGCGC TTTCCGGCGC ATTGATGCAG
GTGTTGTTGC GCAATCCGCT GGCCGAACCC TACGTGCTCG GCGTCTCCGG CGGGGCGTCC
ACGGGTGCGC TGCTGTCGAT GCTGCTGATG CTTCCGCAAT GGATCGTGCA CACCAGCGCG
GCGGGTGGCG CGCTGGTGTC CATGCTGCTC GTCGCCACGC TTGCCCGCCG TGACCTGCTC
AACCCAAAAG TGCAGGGCGG ACACCAGGAG GCCGGCGCGC GGTTGCTGCT GACCGGTGTC
ATCCTGGCCG CGGGGTGGGG CGCGCTGATC ACGCTGATCC TCGCCATCGC GCCGGAATCG
CGCCTGCGCG GCATGTTGTT CTGGCTGACC GGTGACCTCG GTGGCACGGC CGCCTATGGC
GCGGCGTTGG CCACCTTGAT CGCCGCACTG CTGCTGGCCA TGCCGATGGC GCGGGCGCTC
AACGTGATGC TGCTGGGTGA GACCGTGGCG CAATCGCTGG GTGTTCGCGT TGGCCGCGTG
CGCCTGGCTA CCTTCCTGAT TTCCTCCATT TCGATTGCCG CCGCCATCAC GACGGCCGGG
TCGATTGGCT TCGTCGGCCT GGTGGTGCCA CACATGGTGC GCCTGGCCTG GGGGAACGAC
CAGCGCCTGC TGCTGCCGGC ATCAGTGCTG CTGGGCGGCA CCTTGCTGAT GGCTGCCGAC
CTGATCGCGC GTACCGTGGT TGCCCCCACG CAACTGCCGG TGGGCGTCAT CACGGCGCTG
CTGGGCGTGC CGACCTTCCT CTACCTGCTG CTGCGGAGAC CGCGATGA
 
Protein sequence
MAELRRALIV WGVLALAGLA VFGLSLAIGS VSLDAGQLWQ ALSGADDGTA GAIVRELRLP 
RAAAAFACGG LLALSGALMQ VLLRNPLAEP YVLGVSGGAS TGALLSMLLM LPQWIVHTSA
AGGALVSMLL VATLARRDLL NPKVQGGHQE AGARLLLTGV ILAAGWGALI TLILAIAPES
RLRGMLFWLT GDLGGTAAYG AALATLIAAL LLAMPMARAL NVMLLGETVA QSLGVRVGRV
RLATFLISSI SIAAAITTAG SIGFVGLVVP HMVRLAWGND QRLLLPASVL LGGTLLMAAD
LIARTVVAPT QLPVGVITAL LGVPTFLYLL LRRPR