| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2685 |
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| Symbol | |
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| ID | 4039510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2917100 |
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| End bp | 2918914 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637978083 |
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| Product | putative type 4 fimbrial biogenesis PilY1-related protein transmembrane |
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| Protein accession | YP_584827 |
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| Protein GI | 94311617 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.687504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCATC GCACATGCTT CGGCGGCATC GTCATCCTGG TACTTTGGCT GAGCATGACC
GCCCCCAGCC ATGGCTCCAC GACCGGTCAG CTTCCGCTCA GCTATCGCAT CTCGGCAGGC
AGTTTTCCAT GGACCGGCCG GCTCCATGCA GTCGTCTTCC GCACCGCGCG CATCCACACT
TCCACCGTGC TCACGAAATG GGAGGCGGGC GCCGAGCTCG ACTGGCGCGA TACCGCTTCG
CGCAGGCTAT ACCTCGGTGG CGATCACCTT GTGCCACTCC ATTGGCACAC CATTGACGCC
GACGCCCAGG CAGTACTTCG CACCCCCGAG CCCAGTGGCA ATGGCACGAG GCGACTTGCA
TGGTTGCGAG GCGACAGGAC GGACGCCACA CTTCGCCCGC GCGACACGCG ATTGGCCAGC
GGCGCCGGCG CCCGCGTGCG CGTTGTGGCA GCCCCAGCCT GGCTGCCGAT GCAACCGGGA
CACGCCCAAT TTCGCCTGCG TCACGCAAGC CGCCCGGTCA CCGTCTGGAT CGGTACGCGC
GACGGCATCG TGCATGGCTT CGATGCCGTG ACCGGCAAGG AGCTTGCAGG ATTCCTCCCG
CGCGCCGCGC TAGCTGGTTC CGCCGCCCTC ACCGTACCGG GTGGCGCCAT GCCCGTGGCG
CCTTGCCCGC GCCCGGACAG CATCGACGCG GATCCATCCG GAGTCTGGCG GACGCTGTTG
TTGTGCGGCA TCCCGTCGAC GGACAGGCAG CCGGCCGCCG TGTTCGCCCT GGATGTCTCG
TCACCGGAAA GCGAAGCGCC GATCCGGCTG CTCTGGGAGA TTCCTGCTTC CGAGACGTTG
CCATTGACAG GCCAGGGCCC GATACGCGCA CTCATGTGGA TCGAACACGG CGCACGTCGC
TGGGCCGCGC TGACCATTGT CACCGCGGCG CCGGAAGCCA GCTCACCTGC CGGGATTGCC
TTGCTGCCGC TTGACCGGCC CATCGTGAAT GGACTCCCAT CCGGCACAGT GCCAAGGCTA
TATCTGCCCT CGACCGGATG CGGTGCCGAC ACCACCGGGA CCCGGCTGCT CGCAGCCAGC
GTACTTGCCA ACGCAAGTGG CCACGCTCGT GCCGCCTACG TCGTCGACGA CACGGGCAGA
CTTTGGCGAT TCGGACTCGA TCACCTTGGC GCGACGCAGC AGGCGGAGTC AGCACGATGC
CTGCATCGTC AGCGCGGAAG TGCCACCGCC GAGGCACCAA TCGTCATGCA TCCGTCCAGC
GGACCGCTCG TCATCTACGC GGGCGGTGGC GAGCTTTCCG CAATTCCCGA TGGGCGCGGT
CCGCGCGGCA CCCCCTCGCG GATCGACGCC AGCGTGTCAG GCGATGGCGT GATCTTCCGA
ACGGGCCAGC CCCAATTGGA CACCGGCGCG AATGGCTGGA CTCTTGCACT CCCCCATCCT
GGGGAATCGA TCACGACGCT GGACGACGTT GGCCCTGCGC ATCTGAGCTT CACCACGCTA
ACACCCGACG GGCGCACTCG CAGCTACCTG ATCGAAGCGG CCAGCGGAGA GTCGGTCATG
CAAACGGCCC CGGACGGCAC GCTCGTGCGC GCCGTAACCG GTGTGCCGTT CGATGACCGG
TTCGGCACAC CAATCGCCGT GGCATCGCCA ACCTCGAACG GCGGGCCGGT CGTGCCCGGC
AGCTCGACCT TCGACACATT CGAACTCGGC ATCTGGCAGG TCGACGGCAA CACCGCGCAT
CTCGCGCAGA ACACGCACTA TCGGCGCCGG CGCGGACGCC TTGGCTGGCG CGAACTGATC
CGGACCGAGC CATGA
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| Protein sequence | MHHRTCFGGI VILVLWLSMT APSHGSTTGQ LPLSYRISAG SFPWTGRLHA VVFRTARIHT
STVLTKWEAG AELDWRDTAS RRLYLGGDHL VPLHWHTIDA DAQAVLRTPE PSGNGTRRLA
WLRGDRTDAT LRPRDTRLAS GAGARVRVVA APAWLPMQPG HAQFRLRHAS RPVTVWIGTR
DGIVHGFDAV TGKELAGFLP RAALAGSAAL TVPGGAMPVA PCPRPDSIDA DPSGVWRTLL
LCGIPSTDRQ PAAVFALDVS SPESEAPIRL LWEIPASETL PLTGQGPIRA LMWIEHGARR
WAALTIVTAA PEASSPAGIA LLPLDRPIVN GLPSGTVPRL YLPSTGCGAD TTGTRLLAAS
VLANASGHAR AAYVVDDTGR LWRFGLDHLG ATQQAESARC LHRQRGSATA EAPIVMHPSS
GPLVIYAGGG ELSAIPDGRG PRGTPSRIDA SVSGDGVIFR TGQPQLDTGA NGWTLALPHP
GESITTLDDV GPAHLSFTTL TPDGRTRSYL IEAASGESVM QTAPDGTLVR AVTGVPFDDR
FGTPIAVASP TSNGGPVVPG SSTFDTFELG IWQVDGNTAH LAQNTHYRRR RGRLGWRELI
RTEP
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