| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2635 |
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| Symbol | |
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| ID | 4039461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2870784 |
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| End bp | 2872484 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637978036 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_584781 |
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| Protein GI | 94311571 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000204928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAA CGCCGTCCGT TCGCCCCCAT TTCCAGTTCT GGCCCAAACG GGTGCCGACG
AGCATCGTGC TGCCGGAGAC TTCGCTCTGG TACAACCTCG AAGTCTCGGC GCACCGTTAT
GCGGACAAGG CGGCGATCCG CTATTTTGGC AATGCGATCA CGTTCCGTGA ACTGGAGGCG
CAAGCCACCG CGCTGGCAGG CTGGCTGCAG CAGAAGGCAG GGGTGAAGAA GGGCGATCGT
GTGTTGCTCT ACATGCAGAA CTGCCCGCAG TTCATCATCA GCTACTACGC GATCCTGCGT
GCCGATGCCG TGGTGGTACC GGTCAATCCG ATGAACCGGT CCGAGGAGTT CAAGCATTAC
GTGACCGACG GCCAGGCGCG CGTGGCCATC TGTACGGCGG ATCTGGCCGC TGGCGTGATG
CAGGCCGATG CCGAACTGTC AGCCGATGAG CGCCTCCAGC ATCTGCTCGT GACCCAATAC
ACCGATGCCC TGCCGCCGAC CCACGTGCAT CCGGAGGACG CACCGCCGGC TTGGCTCACC
GCCGAGCATC CGCTGCCGGA CAACGCCACG CCGTGGGCCA AGGCGCTTGC CGCCGGCCTG
AAGCCAGGCC CGCATACCGC CGGACCGGAT GACATGGCCG TGATGCCGTA CACCTCTGGC
ACCACCGGCT TCCCGAAAGG TTGTATTCAT ACCCATCGCT CGGTGATGCA CAACATCGTC
GGCGGCTCGA CGTGGTCGGG CAGCGGCGCG GAATCGGTGA TCCTGTCGGT GCTGCCGCTG
TTCCACGTGA CGGGGATGCA GTACGGCATG AATGGTCCGA TCTACAGCGG CGCGACGGTG
GTGATGCTGC CGCGTTGGGA TCGCGAAGTG GCTGGCCACC TGATCTCCCG CTACCAGGTC
ACGCACTGGA CCAATATCCC GACCATGGTG ATCGACTTCC TGGGCAGCCC GAACCTGGCG
TCGTTCGACA TGAGCAGCCT GCGCTATATC GGCGGAGGCG GCGCGGCGAT GCCGCAGGCC
GTGGCGGAGC GCCTGAAGAC TCAGTTCGGC CTGAACTATC TGGAAGGTTA CGGCCTGTCG
GAAACGATGG CGCCGACGCA CAGCAACCCG GCCGACCGGC CGAAGCTGCA ATGCCTGGGC
GTGCCGACGT TCAACACCGA CGCGCGCGTG GTCGATCCGG TCACGCTGAA GGAACTGGCG
CCGAACGAGG TGGGCGAGAT CATCGTGCGC GGTCCGCAGG TGTTCAAGGG TTACTGGGGC
AAGCCTGACG CCACGCGCGA TGCGTTCATC GAGTTCGAAG GCCAGACGTA CTTCCGCACC
GGCGACCTCG GCCGCATGGA CGAGGAAGGC TACTTCTTCA TCACCGATCG TCTGAAGCGC
ATGATCAATG CCTCTGGCTT CAAGGTGTGG CCGGCGGAAG TGGAAAACCT GCTGTACAAG
CATCCGGCCG TGCAGGAAGC CTGCATCATT GGCACGCGCG ATGCCTATCG CGGCGAAACG
GTGAAGGCGG TGGTGGTGCT GCGCGCGGAT GCCAAGGGCA AGACCCAGCC GGAAGACATC
ATCGAATGGG CCAAGGAGCA CATGGCCGCG TACAAGTATC CGCGCGTGGT CGAGTTCGTC
GATGCCCTGC CGAAGTCCGG CACCGGCAAG GTGATGTGGC GCCAGCTGCA GGAAACGGAA
AACGTGCGTC AGGCTGGCTG A
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| Protein sequence | MTTTPSVRPH FQFWPKRVPT SIVLPETSLW YNLEVSAHRY ADKAAIRYFG NAITFRELEA
QATALAGWLQ QKAGVKKGDR VLLYMQNCPQ FIISYYAILR ADAVVVPVNP MNRSEEFKHY
VTDGQARVAI CTADLAAGVM QADAELSADE RLQHLLVTQY TDALPPTHVH PEDAPPAWLT
AEHPLPDNAT PWAKALAAGL KPGPHTAGPD DMAVMPYTSG TTGFPKGCIH THRSVMHNIV
GGSTWSGSGA ESVILSVLPL FHVTGMQYGM NGPIYSGATV VMLPRWDREV AGHLISRYQV
THWTNIPTMV IDFLGSPNLA SFDMSSLRYI GGGGAAMPQA VAERLKTQFG LNYLEGYGLS
ETMAPTHSNP ADRPKLQCLG VPTFNTDARV VDPVTLKELA PNEVGEIIVR GPQVFKGYWG
KPDATRDAFI EFEGQTYFRT GDLGRMDEEG YFFITDRLKR MINASGFKVW PAEVENLLYK
HPAVQEACII GTRDAYRGET VKAVVVLRAD AKGKTQPEDI IEWAKEHMAA YKYPRVVEFV
DALPKSGTGK VMWRQLQETE NVRQAG
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