| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2616 |
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| Symbol | |
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| ID | 4039442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2847259 |
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| End bp | 2848143 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637978017 |
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| Product | farnesyl-diphosphate synthase |
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| Protein accession | YP_584762 |
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| Protein GI | 94311552 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0537917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.394724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATT TCGCCACTTG GATGCGGGCG CAGGGCGCCC GCACCGAAGC CGCTTTGGAA
GCGGCCCTAC CTTCCACGGA CACAATTCCA TACACCCTCC ATGAGGCGAT GCGCTATGCT
GTGCTCGGCG GTGGCAAGCG TGTGCGCCCC CTGTTAGTGC ACGCTGCGGG CGAGGTGGTC
GGTGCGACAC CCGAGGCCTG CGACGCCGCA GCATGCGCCG TCGAGATGAT TCACGCCTAT
TCGCTGGTCC ACGACGACAT GCCCTGCATG GACGACGACG ATCTGCGCCG CGGACGCCCC
ACGGTCCACA AGGCCTATGA CGAGGCCACG GCCCTGCTGG TCGGTGACGC GCTGCAGAGC
CAGGCGTTTA TCGTGCTGGC CCAGACCCCG GCTCTGGCTG CGGAAGCGCG CCTGAAAGTG
GTGGCGGAAC TGGCCGTGGC ATCGGGCTCG ATAGGCATGT GCGGTGGACA AGCCATCGAC
CTCCAGAACG TTGGCAAGGC CATGACCCGC GAGGCGCTCG AAGGCATGCA CCGCATGAAG
ACCGGCGCCC TGTTGCGCGC CAGCGTGCGC ATGGGTGCGT TGTGCGGAAA CATCGACCAG
GCCGGCCTTG TGGCGCTTGA TCGATATGCC GCGGCCGTGG GATTGGCGTT CCAGGTCGTG
GACGATATTC TCGACGTCAC TGCCGACACG GCAACGCTTG GCAAGACGGC GGGCAAGGAT
GCCGCGAACG ACAAGCCGAC CTACGTATCG CTGCTTGGCC TGGATGCCGC ACGCGAGCTG
GCTGCCCAGC TTCGCACCGA CGCCCACGAG GCGCTGGAGG GATTCGGCAC ACGCGCTGGC
CGGCTCGCCG AACTGGCCGA CCTGATCGTG CTGCGCTCAA ACTGA
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| Protein sequence | MSDFATWMRA QGARTEAALE AALPSTDTIP YTLHEAMRYA VLGGGKRVRP LLVHAAGEVV
GATPEACDAA ACAVEMIHAY SLVHDDMPCM DDDDLRRGRP TVHKAYDEAT ALLVGDALQS
QAFIVLAQTP ALAAEARLKV VAELAVASGS IGMCGGQAID LQNVGKAMTR EALEGMHRMK
TGALLRASVR MGALCGNIDQ AGLVALDRYA AAVGLAFQVV DDILDVTADT ATLGKTAGKD
AANDKPTYVS LLGLDAAREL AAQLRTDAHE ALEGFGTRAG RLAELADLIV LRSN
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