| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2408 |
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| Symbol | |
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| ID | 4039228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2617367 |
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| End bp | 2617987 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637977804 |
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| Product | phage-related integrase |
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| Protein accession | YP_584554 |
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| Protein GI | 94311344 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00105004 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000355943 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATGGCAC TCTCTGATCT GACCGTGCGG CAAGCCAAGG CCGCCAAGAA AACCTACAGC
ATCCCCGATA CCGATGGCCT CGGCCTGGTG GTCGCCCCCA CCGGCGGCAA ATCGTGGCAC
CTGCGCTACT ACTGGCTCGG CAAGCAAAAA CGCATATCCC TGGGCAACTA TCCCGAGATC
GGCCTGCGCG AAGCCCGCAC CTTGCGCGAC GAAGCCAGGG CGCTCCTGGC CCAAGGCATC
AACCCCCACA CCGACCGCAA GCAGAAACGG CATGCGGTCA AGCTGGCCTC GGACTACACA
TTCAAGGCAG TCTTCGATGC TTGGGTCGAG CACCGCGCCA AGGAACTCAA GGAAGGCCGG
AACAGCACAC TGTCGCAGAT CAAGCGGATC TTCGAGAAAG ACGTGCTGCC CAGCCTCAAG
CAGATGTCGA TCTATGACAT TCGCAGGCCG CAACTCCTGG GCGTCCTGGC GCGGATCGAG
AAGCGCGAGG CCTTCACCAC TGCCGAAAAG GTCCGGACCT GGCTGGGGCA GCTATTCCGC
TATGCGCTCG TCATCGTCGA GGGCATGGAG GCCAATCCGG CCACGGACCT GGACGTAGTG
GCCGAGCCCA AGTGTGCGTG A
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| Protein sequence | MMALSDLTVR QAKAAKKTYS IPDTDGLGLV VAPTGGKSWH LRYYWLGKQK RISLGNYPEI
GLREARTLRD EARALLAQGI NPHTDRKQKR HAVKLASDYT FKAVFDAWVE HRAKELKEGR
NSTLSQIKRI FEKDVLPSLK QMSIYDIRRP QLLGVLARIE KREAFTTAEK VRTWLGQLFR
YALVIVEGME ANPATDLDVV AEPKCA
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