| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2400 |
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| Symbol | |
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| ID | 4039220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2610350 |
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| End bp | 2611240 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637977796 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_584546 |
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| Protein GI | 94311336 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000468465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000339516 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAATTAC GACATCTGCG CTATTTCATG GCCCTGGCTG AAGAGTTGCA TTTCACGCGC
GCCGCCGAGC GCCTGCACAT CGAACAGCCC CCCTTGTCCC GTGCCATCAA AGAACTGGAG
GACGAGCTAG GGGTCGTGCT GTTCGACCGG AACCGCCGTG GAACCGTGCT GACGTCGGCG
GGTGTTGTCT TTCTTCAAGA TATCCGCAGA TTGTTCACCG TGCTCGAACA GGCACGCGAA
AACGCCCAGG CCGTGGCAGC AGGTTTGCGA GGCAGTCTGC GCATCGCGAT TTCCGACGGG
GCAATCGATG CTCGCCTGTC GGCATTTCTG GCCCGGTGCC GCGCGGAGGA GCCGGAGATC
GAGATACGGC TGTCCGAGGT TCCGCTGGCC GAGCAGTTGC GCGGCCTGCG GTCCGGGGAT
TTCATGATCG GATTCGCGCA TACGGCCGAC GTCGGCGACG ACATACGGGC TGAGCCCATC
TGGCGAGATC CATTGGTCAT TGCCGTGCCG GCACGGCACG CACTGCTCGC CCACAAAAAG
GTCCCGCTCC AAGAAGTCGG GATCCATCCA CTGGTCTTGT GCGATCCCCA TGCGTGCGAG
GGCTACTGCC GGGAACTGAC ACGACTGCTG CAGGTGCTTG AGCACAAGTT GAACGTCGTC
GAGGAGGTGT CCTCGCTGGA CATGATGCTC ACCTTGGTCG GTGCTGGTTA CGGTATCGGC
TTTCTCGCGG CGAGCAAGAT TCCGGTTTGC CAACGCCCGG ACGTGGTGAT CCGTCCCCTG
GCCATCGATT CAGCCGTCAT CACGACTTAC TTGCTGCGGG CCGACAGCAG TGATTTGTCG
GCTTCGCTGG AGCGGTTCAT CGTTCGCCTA CGTGACTCTG CGAGCGGCTG A
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| Protein sequence | MELRHLRYFM ALAEELHFTR AAERLHIEQP PLSRAIKELE DELGVVLFDR NRRGTVLTSA
GVVFLQDIRR LFTVLEQARE NAQAVAAGLR GSLRIAISDG AIDARLSAFL ARCRAEEPEI
EIRLSEVPLA EQLRGLRSGD FMIGFAHTAD VGDDIRAEPI WRDPLVIAVP ARHALLAHKK
VPLQEVGIHP LVLCDPHACE GYCRELTRLL QVLEHKLNVV EEVSSLDMML TLVGAGYGIG
FLAASKIPVC QRPDVVIRPL AIDSAVITTY LLRADSSDLS ASLERFIVRL RDSASG
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