| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2260 |
|---|
| Symbol | |
|---|
| ID | 4039078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 2480908 |
|---|
| End bp | 2481480 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637977655 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_584408 |
|---|
| Protein GI | 94311198 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.209186 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.404919 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCG CACAATCGAT TGACAATGAA TATGAGCCCT TCTTCGCGAT GGCTCGGGAA
CGCAACGTGA TCTTCTACTA CGTCGGCTAT TTTTCGCAGA ACATCATCGC CGCGATGTCC
GACGCGGTGC GCCTGCAGCT TTCCGTCAGC GGCGTGGACG GCACCACGCG TCGCAAGCTG
TTCTCGTCGT TCGTGGAGAT GGCGCAGAAC ATCGTGCACT ACTCGTCCGA TTCGCTGACA
TCGCCATCGC AAGCCGACGG TCATCTGCGC CACGGTTCCG TCTGCATCAG CATGGTCGAC
GAACACTACC GCCTGATGTG CTCGAATCCA GTGTCCACCG CGCGCGTGGC GCAACTGCGC
GGCACGCTGG AACGCGTGCG CACCATGACG CTCGACGAGA TCAAGCGCGC CTACAAGGAA
ACCCTGCGGG CCGAGGTGCC GGAGGGCAGC AAAGGCGCCG GTCTCGGCAT CCTGACGATG
GCGCGCGATG CCAGCGCCCC TCTGGAGTAC AACTTTCAGC CGATCGATTC CGATCCGGTC
TCGACGATGT TCCAGCTCGT CGCCACCATC TGA
|
|---|
| Protein sequence | MTAAQSIDNE YEPFFAMARE RNVIFYYVGY FSQNIIAAMS DAVRLQLSVS GVDGTTRRKL
FSSFVEMAQN IVHYSSDSLT SPSQADGHLR HGSVCISMVD EHYRLMCSNP VSTARVAQLR
GTLERVRTMT LDEIKRAYKE TLRAEVPEGS KGAGLGILTM ARDASAPLEY NFQPIDSDPV
STMFQLVATI
|
|---|
| |