| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2173 |
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| Symbol | |
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| ID | 4038989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2378181 |
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| End bp | 2379431 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637977566 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_584321 |
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| Protein GI | 94311111 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.355193 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCAGT CGCAGGTGGT GGTGCTGATC GCAGGCTTGA TAGCGCTGCA GATGGCGATC
GTCTGTGCCG TGTTGCGGCG CTCTGCGGGT ATGGAGCGTA GCGGGCTCAC GTCGTGGGCG
CTCGGCGATC TGTTGGTGAC CCTGGCCGTG GTCCTTCAGG CCGCGCACGC ATACCGGCCA
GAGTGGCCGC TGGCGGTGCT CCCTGAGTTC GCCCTGACCG CGGGACTGTC GATGATGGTC
TACGGCACAC GGCATTTCGC GGGCAAGCGT GGTCGTGGCG TGGTGCTTGG TGTGCTGAAC
CTCCCCGGGT TGGCCGCGCT GACGATTTAT GCGGTCGGCG GGCTTGCCGA AATGGGCCTG
GGGCGTGTGC CGACCGGCAC ACTCGCCTGG CTCGGGCTCG CCACGGCGTC GATCCAGACC
CTGCTGCTAC TGGAAATTGC CCGGATCACG GTTGCCCTGG TGCCGCTCAA GCGCGGCACG
GGTCGGCTGG CAGCACTCTC GTTATCTGTC CTGTCCCTTG GTTGCGCAGT ACTGGCTGGC
GCGGAGGCCT GGCCGATGTT CGCCGCGCTC ATGGACGGCC ACGTGCAGCC GCTGGTTGAT
CGTCACGAAA GCATGACTGT CTGGTTCGTG TTCGGCGTGA TGGGGCTGGC CGTCAGCTTC
GCGCTGATGG CCCATGACCG TCTGCGCCAG ATCATCGAAC GTCGCGCGCG GCACGACGAC
CTAACCGATG TGCTATCTCG TGGCGCATTC TGGGAAGAAC TCGAACTTGC CTGCAAGCAG
GCGGAGCGCT CGCGCAAGCC ACTTACCGTG GCGTTCATGG ACCTGGACCA CTTCAAGGCC
ATCAACGATC TCTATGGACA CCTGGCTGGA GACAGCGTGC TGCGCCATTT CGCGGGACTG
CTGCGCAAGG TGGCGGCGCC GGACTCGGTG ATCGGCCGTC TCGGCGGCGA GGAATTCGCG
ATCGTGATGC CTGCCACCGG ACTGGAGACG GGCCGCGCCA TCAGCGTCCG ACTCAGCGCA
CTGGTGCGGG CGACACCGTG CCCGTCCGAG CCAGACCCAA TCGCCTACAC GGTCAGCATC
GGGATGGCGG AATGGCAGTT GGGCGAAAAC GCCGACGCGG TCATGCGTCG TTCGGATCGC
GCGCTCTATG ACGCCAAACA GATGGGCCGG AACTGCGTTT CCTCGCACGA TGCGGAGGAG
TTCACCGGAA TGCCGCGTCG CCCACGCGTG CGCGAACGCG AACCTTCGTA A
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| Protein sequence | MFQSQVVVLI AGLIALQMAI VCAVLRRSAG MERSGLTSWA LGDLLVTLAV VLQAAHAYRP
EWPLAVLPEF ALTAGLSMMV YGTRHFAGKR GRGVVLGVLN LPGLAALTIY AVGGLAEMGL
GRVPTGTLAW LGLATASIQT LLLLEIARIT VALVPLKRGT GRLAALSLSV LSLGCAVLAG
AEAWPMFAAL MDGHVQPLVD RHESMTVWFV FGVMGLAVSF ALMAHDRLRQ IIERRARHDD
LTDVLSRGAF WEELELACKQ AERSRKPLTV AFMDLDHFKA INDLYGHLAG DSVLRHFAGL
LRKVAAPDSV IGRLGGEEFA IVMPATGLET GRAISVRLSA LVRATPCPSE PDPIAYTVSI
GMAEWQLGEN ADAVMRRSDR ALYDAKQMGR NCVSSHDAEE FTGMPRRPRV REREPS
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