| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2152 |
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| Symbol | |
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| ID | 4038967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2348481 |
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| End bp | 2350802 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637977544 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_584300 |
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| Protein GI | 94311090 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.431826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACAG AGTCAAAGCC GGAAACCACC AACACTCCCG GACGGGCCCG GATTGCAACC
TGCCTGGGCG CGCTTGCCGG TCTCCTTATC GCGCTGGGAA TGGCCTTTGG CGCCTGGCAC
GTCTATCAGG CATGGCTGTC GCTCCCGGAC GTCAATAGCC TTGCCGCGTT CAAGCCAGAC
AGGCCGCTGC GCATTTATTC TCAGGATGGC ATCCTCCTGG CCGAGTATGG CGACGAGCGC
CGGGAGATCG TCCCGCTTTC CAGAATTCCG ATCGTCGTGC AGCAGAGCCT GCTGGCGATC
GAAGATGCGC GGTTCTACGA ACACGGTGGC GTGGACTTCT CGGGATTGTT CCGCGCTGCA
TGGGCCAACT TCGCATCGGG CCGGCACGCG CAGGGGGCCA GCACCATCAC CATGCAGGTA
GCGCGCCGCC TGTACCTGTC CAGCGAGAAG ACTTACGACC GGAAGCTGCG CGAAGTTCTT
CTGGCCTTCA AGCTGGAGCA GCAGTTCAGC AAGCAACGGC TGCTTGAGGT CTATATGAAC
CAGATCTATC TGGGCGAGCG CGCATACGGA TTTGCTGCCG CGGCGAGCAT CTATTTCGAC
AAGTCACTCG ACCAGTTGAC CCCAGCGGAA GCCGCCCTGC TCGCGGGCCT CCCCAAAGCA
CCGTCCGCAT TCAACCCGAC GGTCAACCCG GAGCGTGCCC GCGTACGCCA GCGGTACATC
CTCGCGCGCA TGCACGAGCT TGGATATCTG GGCGACGAAC AGTACGCATC CGCATTGGAT
GAACCGCTTC GGCTGAAGCC ACGTAGCTAT GCCATCGACC CGGCATTTGC CTTTCCGGTG
GAGCGCGCAC GCCAACTGGT CGTGGACCAG TACGGTGAAC GCGCCTATCG CGATGGCCTG
GACGTGACGC TAACCATTCA AACCGCCACG CAGGCAGCCG CTTACGATGC CCTGCATGAC
GGCCTGCTTC GCGCCCAGCA AAGACGACGC TATATCCCGC TGGGACGGGT GGCCATCGAC
GGCAATGCGC CAGCATCGGG GCTTGACGAC TATCCGGATC GGGACGGCCT CACCACGGCC
GTCGTCACCG CCACGGCCGA TCGCAGCGGC CGCCTGACGG TCAAGACGCG CGATGGCACG
ACCCTTCGTG CGCAAGCACC CGCGTATGCC GCGACGCCGC TGACGCGCGG CACGGTTGTC
ACCATGGCAA GCCTGGGTGG CAAATGGGAG ATCGGGCAAG CGCCCGACAT GGAGGGCGCG
CTGGTTTCCA TCGATTCCGT CAGCGGCGAT GTCGTGGCGT GGGTGGGTGG CTATGACTTC
CATCGCGGCA AGTTTGATCA CGCCGTGCAG GCGTTGCGCC AGCCGGGCTC CTGCTTCAAA
CCCTTTGTCT ACTCCGCCTC TCTCGAAAAA GGCTACTTTC CGGGAACCAT GGTGGACGAC
AGTCAGCGGG TACTGGACTC GACCGTCACC GGTGCCCGGC CCTGGCGGCC CAAGAACTAC
GGCGGCCGCT ACGACGGCTT CATCACGGCA CGCGAGGGGC TTGTCCGCTC CAAGAACCTG
GTGACGGTGG GGCTGACGCA GGCTTCCGGT ATCGATTACG TGCGGGATTT CGCGCTGCGA
TTCGGCTTCG CGCCAGACCT GAATCCCGGC AGTTTCCCCC TGGCGCTGGG CGCCGGCAGC
GTGACGCCGA TGCAATTGAC GCAGGCGTAC GCCGTCTTCT CCAACGGCGG CTATCTCGTG
CAGCCGCGCC TGATCGCCCG GATCGTGCAG CGCGGTGACC AGGAGCTCTA CACATCGGCC
GGAGACATCG AGCGCAAACA GATCATCTCC CCACGCAACG CGTTCATCAT GGACTCGCTG
CTTCGCGATG TGGTTCGGAA AGGCACCGGT CGCGCGGCGG CCCATATCGA CAAGGCCGAC
GCTGCCGGCA AGACGGGGAC CTCGAACGAT GCCAGGGACG CATGGTTCGC CGGATACGCG
ACGGGGCTGG CGACCACCGT ATGGGTAGGC CATGACCAGT TCCGCAGCCT CGGGGCGGTC
ACGGGTGGGA CGCTTGCACT GCCGATCTGG ACGGACTTCA TGCGCCACGC CACGGCTGAC
CGCGCCCCGA TCAGCAGAGC GTTGCCGGAC GATGTTGTCG AGGAAAACGG CGACTACATC
TACCGCGAGT ATCGTTCGTC CGCCTGCGTG AGCGATTCCC ACGCATTCAT CCGGACGGGA
TACCGCTGCG CATCCGAGCC CGCGCCTGTC CCGACACGCG AGCAGCAACG CGAGCACGAG
CAGATTCTGG AGTGGTTCCG GCAAGACGCC GATAACGTGT GA
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| Protein sequence | MPTESKPETT NTPGRARIAT CLGALAGLLI ALGMAFGAWH VYQAWLSLPD VNSLAAFKPD
RPLRIYSQDG ILLAEYGDER REIVPLSRIP IVVQQSLLAI EDARFYEHGG VDFSGLFRAA
WANFASGRHA QGASTITMQV ARRLYLSSEK TYDRKLREVL LAFKLEQQFS KQRLLEVYMN
QIYLGERAYG FAAAASIYFD KSLDQLTPAE AALLAGLPKA PSAFNPTVNP ERARVRQRYI
LARMHELGYL GDEQYASALD EPLRLKPRSY AIDPAFAFPV ERARQLVVDQ YGERAYRDGL
DVTLTIQTAT QAAAYDALHD GLLRAQQRRR YIPLGRVAID GNAPASGLDD YPDRDGLTTA
VVTATADRSG RLTVKTRDGT TLRAQAPAYA ATPLTRGTVV TMASLGGKWE IGQAPDMEGA
LVSIDSVSGD VVAWVGGYDF HRGKFDHAVQ ALRQPGSCFK PFVYSASLEK GYFPGTMVDD
SQRVLDSTVT GARPWRPKNY GGRYDGFITA REGLVRSKNL VTVGLTQASG IDYVRDFALR
FGFAPDLNPG SFPLALGAGS VTPMQLTQAY AVFSNGGYLV QPRLIARIVQ RGDQELYTSA
GDIERKQIIS PRNAFIMDSL LRDVVRKGTG RAAAHIDKAD AAGKTGTSND ARDAWFAGYA
TGLATTVWVG HDQFRSLGAV TGGTLALPIW TDFMRHATAD RAPISRALPD DVVEENGDYI
YREYRSSACV SDSHAFIRTG YRCASEPAPV PTREQQREHE QILEWFRQDA DNV
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