| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2139 |
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| Symbol | |
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| ID | 4038948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 2327927 |
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| End bp | 2329276 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637977525 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_584287 |
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| Protein GI | 94311077 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000263742 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCG CGCTGCAGGA TATTCGTCGC ATTACCCATC TGGCCGCCCC CGTGCTGGTT
GGACAACTGG CGGTCATCGC CTTCGGTGTC ATCGACACCA TCATGTCCGG CCGCGCCTCG
GCCACCGACC TTGCCGCTGT TGGCTTGGGC GGATCGATCT ATGTCACGGT CTACGTCAGC
CTGATGGGCG TGCTGCAAGC GCTCGCGCCT GTCGCGGGAC AGTTGTACGG CGCCAACCGA
TCCGCGGAGA TCGGCGCCGA GGTACGGCAG GCAGCATGGC TCGGTGTGGC GCTGGCTATC
CCCGGCATGC TGTTGCTGCT GTTTCCCGCA CCGTTGCTGG AATTCGCCAA AGCACCACCC
GAGTTGGTCG AAAAAGCATC GCACTATCTG CATATCGGTG CATACGGCCT ACCCGCAGCG
CTGGGTTTTC GCATCTACAT GGCGCTGAAC AATGCGCTAT CTCGCCCCGT CATGGTGACG
GTGCTGCAGA TTGCTGGCCT GGCACTCAAG ATTCCACTCA ATGCCTGGTT CATCGAAGGC
GGTTATGGCC TCGCCCCGAT GGGCGGGCCA GGCTGCGCGC TGGCATCCAC GCTGATCAGC
TGGATATGGT TTCTGTCCGG ACTGGCGATC CTGCTGCGCG GTGCGGCGTA CCGGTCCCTG
GAGATCTTCA CGCGTTGGGA GTGGCCACGC TGGGACCGGA TTCAGCCTCT TCTGCGCCTG
GGGCTGCCGA TGGGACTCAC CTACCTGATC GAGATCACGT CATTCACCCT AATGTCGATC
TTCATCACAC GCATGGGCAC CGATACCCTT GCGGGGCATC AGATCATCGC CAACCTCAGC
GCCGTGGCGT ACATGATGCC GCTCTCGCTA TCCATCGCGA CCTCGACGCT CGTCGCGCAG
TCCATAGGCG CACGCGATAT GGCTGCCGCA CGGCGTATCG GCTGGCGTGG CATTCGCTTG
GGCGCCGGAC TCGCGCTACT GACCGGCACG CTGCTCTGGC TGCTACGCGA GCCGCTGCTG
CATGCCTATG TCAGCGACCC GGCCGTGATT GCCAAAGCAT TGCCGCTGAT GCTGTTTGTC
GCGTTCTATC AAGCCTTTGA TGCTGTACAG GTCATGAGCG CATTCATCCT GCGCGCGTAC
AAGATCGCGC TGATCCCGAC GCTGATCTAC GCCGGCTCAC TCTGGGGCGT GGGGCTCGGT
GGCGGCTATG TGATGGGTTT CGGCCTGATC GATGCGTTGC CCGCCTTCAC GCGCGGCGCA
TCGGGCTTCT GGTTGGCCAA CAGCATCAGC CTGGCAATTG CCGGAACGCT GCTGGTTCGA
TACTTCATGC GCGTGAGTCG CGTTGGATAA
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| Protein sequence | MSSALQDIRR ITHLAAPVLV GQLAVIAFGV IDTIMSGRAS ATDLAAVGLG GSIYVTVYVS
LMGVLQALAP VAGQLYGANR SAEIGAEVRQ AAWLGVALAI PGMLLLLFPA PLLEFAKAPP
ELVEKASHYL HIGAYGLPAA LGFRIYMALN NALSRPVMVT VLQIAGLALK IPLNAWFIEG
GYGLAPMGGP GCALASTLIS WIWFLSGLAI LLRGAAYRSL EIFTRWEWPR WDRIQPLLRL
GLPMGLTYLI EITSFTLMSI FITRMGTDTL AGHQIIANLS AVAYMMPLSL SIATSTLVAQ
SIGARDMAAA RRIGWRGIRL GAGLALLTGT LLWLLREPLL HAYVSDPAVI AKALPLMLFV
AFYQAFDAVQ VMSAFILRAY KIALIPTLIY AGSLWGVGLG GGYVMGFGLI DALPAFTRGA
SGFWLANSIS LAIAGTLLVR YFMRVSRVG
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