| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2099 |
|---|
| Symbol | |
|---|
| ID | 4038907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 2279440 |
|---|
| End bp | 2280783 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637977485 |
|---|
| Product | HflK protein |
|---|
| Protein accession | YP_584247 |
|---|
| Protein GI | 94311037 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | [TIGR01933] HflK protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.080069 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTGT TCCCTCGGAA TCCTGACCCG CACATCGTGC CAGGCAGCCG CGCCCTGCGG
TTTGCGCGCT GGCCGCGCCT GCGCGCCATC TTCTCGCTGA ACGACCCCCG CTGGGGCCGC
AACGGACAGG ACGATGAAGA CAAGGACAAT AGCCGCCAGC AAAACCAGCG CCCGCAGGAT
GGCCCGCCCG ATCTCGATGA GCTCTGGCGC GACTTCAATC GCCGCCTGAA CGGCCTGCTG
GGCCGCAAGG ACAACGGCGG TGGTGGCCAG GGTTTCGGCA GTGGCCCGCG CCCGTCAGGC
AAGGGTTCTA ATGTCGGCAT CGGCGTGATC ATCGCCGCCG TGATCGGTAT CTGGCTGGCC
AGCGGTTTCT TCATGGTGCA GGAAGGGCAG ACCGCTGTGA TCCTGCAGTT CGGCAAGTTC
AAGTACTCCA CCGGTCCCGG TATCAACTGG CGTATGCCAT GGCCGATCCA GTCGGCCGAA
GTGGTAAACC TGTCGGCTGT GCGTTCGGTG GAGGTCGGTC GTGCCACGTC GATCAAGGAC
AGCAACCTGA AGGACTCGTC GATGCTGACG CAGGACGAGA ACATCATCGA CGTCCGGTTC
ACGGTGCAAT ACGACATCCA GGACGCCAGC GAATTCCTGT TCTTCAACAA GACCGACCGC
GGTGGCGACG AAGAACTCGT GACGCAGGCC GCGGAAACGT CAGTGCGTGA GATCGTCGGC
CGCAACAAGA TGGATGCGGT GCTCTACGAG AATCGCGAGC AGATTGCGCA ATCGCTGGCC
AAGTCGATTC AATCGATCCT CACGGCCTAC AAGACGGGTA TTCGTGTGAT TTCCGTCAAC
GTTCAGAGCG TGCAGCCGCC CGAGCAGGTG CAGGCCGCAT TCGACGACGT CAACAAGGCG
AGCCAGGATC GCGAGCGCGC GATCAGCGAA GGCCAGGCCT ATGCGAACGA CATCATTCCG
CGCGCGAAGG GCACGGCGGC TCGCCTGAAG GAAGAATCGG AGGCCTACCG TTCCCGCGTG
GTGGCACAGG CCGAAGGTGA CGCAGCGCGC TTCCGCTCGG TGCAGTCCGA GTATGCCAAG
GCACCGCAGG TCACGCGTGA CCGTATTTAT CTGGAGACCA TGCAGCAGAT CTACGCCAAT
TCGAGCAAGA TTCTTGTCGA TGCCAAGTCG GGCAATAACC TGCTGTATCT GCCGCTGGAC
AAGCTGATGA CACAGGTGCC GGGCTCGTCG GCCGCACCGT CCTCGGCAGC GCCGGGCACG
AATGCGCCGG CGGTACCGGA TGCGACCACG CCGGATATCC GGTCACGTGA GTCGATGCGC
AACCGCGACC GCGACATTCG CTAA
|
|---|
| Protein sequence | MPLFPRNPDP HIVPGSRALR FARWPRLRAI FSLNDPRWGR NGQDDEDKDN SRQQNQRPQD
GPPDLDELWR DFNRRLNGLL GRKDNGGGGQ GFGSGPRPSG KGSNVGIGVI IAAVIGIWLA
SGFFMVQEGQ TAVILQFGKF KYSTGPGINW RMPWPIQSAE VVNLSAVRSV EVGRATSIKD
SNLKDSSMLT QDENIIDVRF TVQYDIQDAS EFLFFNKTDR GGDEELVTQA AETSVREIVG
RNKMDAVLYE NREQIAQSLA KSIQSILTAY KTGIRVISVN VQSVQPPEQV QAAFDDVNKA
SQDRERAISE GQAYANDIIP RAKGTAARLK EESEAYRSRV VAQAEGDAAR FRSVQSEYAK
APQVTRDRIY LETMQQIYAN SSKILVDAKS GNNLLYLPLD KLMTQVPGSS AAPSSAAPGT
NAPAVPDATT PDIRSRESMR NRDRDIR
|
|---|
| |