| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_2095 |
|---|
| Symbol | |
|---|
| ID | 4038903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 2275034 |
|---|
| End bp | 2275642 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637977481 |
|---|
| Product | phosphoribosyltransferase |
|---|
| Protein accession | YP_584243 |
|---|
| Protein GI | 94311033 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2236] Predicted phosphoribosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.606064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.330855 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTATC CATTGGCCAT CGATACAAGA AAAGACGCCA TGAACCTGCC AATCAATGAT
GACGAGAACC TGTGGGTCTC GTGGGACGAC TATCATCGCC TGATCGCGCG TCTGGCGCTG
AACGTGCACG AGTCGGGCTG GAAGTTCGAC CAGATCCTGT GTCTGGCGCG CGGCGGCCTG
CGCGTGGGTG ACCAGATGTC GCGCATCTTC GATGTGCCGC TGGCGATCCT GGCCACGAGC
TCGTACCGCG AGGCGGCGGG CACGCAGCAG GGCGAACTCG ATATCGCGCA GTACATCACG
ATGACGCGTG GCAATCTGTC CGGCAGGATC CTGCTGGTCG ACGACCTCGT CGACTCGGGT
GTCACGCTGG AACGCGTGGG ACGCCACCTG AAGGAGCGCT ATCCCGAGGT GACGGATGTG
CGTTCGGCCG TGCTCTGGTA CAAGGCTTGT TCCAAGGTGA CGCCCGATTA CCACGTGACG
TTCCTGCCTT CGAACCCCTG GATTCACCAG CCGTTCGAAG AGTACGACAC GCTGCGTCCG
CATAACCTTG CAGCCTGGCT CAAGCGCGGC AAGCGCGCCA GCCTGCAGGA AGACGATTCG
GCGGCCTGA
|
|---|
| Protein sequence | MLYPLAIDTR KDAMNLPIND DENLWVSWDD YHRLIARLAL NVHESGWKFD QILCLARGGL
RVGDQMSRIF DVPLAILATS SYREAAGTQQ GELDIAQYIT MTRGNLSGRI LLVDDLVDSG
VTLERVGRHL KERYPEVTDV RSAVLWYKAC SKVTPDYHVT FLPSNPWIHQ PFEEYDTLRP
HNLAAWLKRG KRASLQEDDS AA
|
|---|
| |