Gene Rmet_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_2017 
Symbol 
ID4038823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp2182359 
End bp2183306 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content48% 
IMG OID637977401 
Producthypothetical protein 
Protein accessionYP_584165 
Protein GI94310955 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.02732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCAGG ACATGGCAAG CGCCGTGTGG CAGAATTGCT CGCCCGCCCC TAGCCAATTC 
GACATGCCCG ATATCGAAGA CACGACGCCA CCGCCAGTGC TTTACAAGTT CATGTCCATC
AATGGTGAGC GTTGGACTTG GTTTCAGAAC CTCATCCGAC TCGGTCAAAT CTATCTATCG
TCGCCACTCG ATTTCAATGA CCCTTTTGAT TGTTTGCCAC GCTTGGATAT TCCAAGCAAT
CAGGATAAGA GGGTAAATAA GAGATTGTTT CGAGCCGGCG CGAGGCAAGG CCATAGCCGG
AAGGTGCGAC GGGAACAGGT TGGAATTGTT AGAAGTCAAT CTAGTTCCGT ATGGCGGGAA
AATTATCAAA ATTCCGCCCA CCGCAGAATT CGAGAAGTCG GCGTTTATTG CGTCTCCGCC
AACAACAGTC ACCCGTTGAT GTGGTCACAC TACGCGGAAA AACATACAGG ATTATCAATT
GGCTTTAAAA CAGGTGTCGG TATATTTAGA ATTGCGCACA AAATAGAATA TTCCGATATC
AGACCGCACT ACAATCATCT CTCAACGAAT TCAAAAGAAT TTTACGATGT TTATCACAAG
AAGGCTAAAT TCTGGGAATA CGAGGACGAG TATCGGATTT TAAGTCTTAA CACCGGAATT
GACCCGAAGT CTTTAATGCG CGGGATTGAG GATGATGCTG ACCTGATGCG GTTCATTGGA
AGGCCGGCAG GACATGGGCC GGCAACTTTA AGTCCATCTG TCATAGCCTC TATAACGTTT
GGCTGCAACA TGCCACCGAA CGAGAGAACA AGGATTGTCG ATTTTGTCAG GGCGCAAGGG
TTGAACGTCG ATTTTTTTGA GGCCGTGCTC GATGAGCATA AGTTCGCGTT GTCCATCCGA
CCTTTCCACA TAGAGCAAGG GCGAGTGCGT AACCGACGCA GACAGTAA
 
Protein sequence
MPQDMASAVW QNCSPAPSQF DMPDIEDTTP PPVLYKFMSI NGERWTWFQN LIRLGQIYLS 
SPLDFNDPFD CLPRLDIPSN QDKRVNKRLF RAGARQGHSR KVRREQVGIV RSQSSSVWRE
NYQNSAHRRI REVGVYCVSA NNSHPLMWSH YAEKHTGLSI GFKTGVGIFR IAHKIEYSDI
RPHYNHLSTN SKEFYDVYHK KAKFWEYEDE YRILSLNTGI DPKSLMRGIE DDADLMRFIG
RPAGHGPATL SPSVIASITF GCNMPPNERT RIVDFVRAQG LNVDFFEAVL DEHKFALSIR
PFHIEQGRVR NRRRQ