| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1960 |
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| Symbol | |
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| ID | 4038765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2135352 |
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| End bp | 2137520 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637977343 |
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| Product | putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane |
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| Protein accession | YP_584108 |
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| Protein GI | 94310898 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0700058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.240709 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGC GCCACCTCTC GCAGTCCGCC CATTCGCACG GCCATGGCAC CCGGCGTGCG
CACCGCCGAA ACACGATCGC CATCGCCGTC GCCACGCTTG CCGTCGCTGC GTGCGGCGGG
TTTGGCACAA ATGGGAGCGG CGGGAACACC GGTCCCAACG TCAAGCCGGC GTTCATATCC
GGCCCCGTCG GAGTCAAATC CTACGACGGC AACACGGATG ACCTGCTGAC GGCGGGGCTG
GGCAAGGACG GACTGGCGGC CGCAGCGCCG GCGTTTGCCA ATCCGAACGC GCCGACGGCC
GTGGAATTGC GCCGTAACGC GATCTGGGCC AACTACCGCG CGATCGTGGA TGTCCAGGCC
GCAGGCGGCT ATGGCTCGCT CTACGGCCCC AACGTCGACG CCAAGGGGAA TGTGACGACC
GGCCAGGGCA AGGTCCCGGG TACCGAGTAC ATCGCATTTA CCGACGACGG CTCGGGCCGG
CAAAACGTGA CGGTCATGGC CCAGGTTCCG GATGGGTTCG ATGTGAAACA TCCCTGCATC
ATTTCCGCCA CTTCGTCCGG CTCGCGTGGT GTCTATGGCG GAATTGCCGT GGGGGAGTGG
GGGCTCAAGC ACAACTGCGC GGTGGCCTAT ACGGACAAGG GCACCGGCGC GGCGCCGCAT
GACTTGGGTA GCGACACCGT GCCGCTGATC GACGGCACCC GGCAGACCCG GGCCGGTGCC
GGCACGCAGG CCCAGTTCGC GGCACAGCCC GGTGCCTCGG AAACGCTGGC GGGCTTCAAT
TCCAGCACCC CGCACCGGCT TGCGTTCAAG CACGCGCACT CGCAGCAGAA CCCGGAGGCG
AACTGGGGCG CCAACACGTT GCAGGCGATC CAGTTCACGC TCTGGGCGGT CAACGACAAG
TTCGGCAGGA CCAATACCGA TGGCATGCGG CAGGCGACGT TCACGCCGGC CAATGTGCTG
GTGATCGCGT CGGCCATCTC GAATGGCGGC GGGGCGGCCA TTGCAGCGGC GGAACAGGAC
ACCGGCGGGT TGATCGACGG CGTGGCCGTC GGGGAGCCGA ATGTGAACCT GCCACCGACG
GCAGGCGTGG TCGTCAAGCG CGGTGGCGTA CCGGTGGCGG CGTCGGGCAA GCATCTTTAT
GACTACACGA CGATTGCCAA CCTGTACCAG CTCTGCGCCA GCCAGGATGC CAGCCTGGGC
AATGCGCCAT TTGCCAAAAC GGCCGGGCAG GCCGCGCTCA ACCGATGCGC GTCACTGGCC
GCCAAGAAAA TGATTGCCGG AGGCAGCACA TCCGCCCAGG CAACCTCCGC GCTGGATGCG
TTGCACCGCG CCGGCTGGGA GCCGGAGTCG GATGACCTGT TCGCGTCGCT TTCGGCGCTG
GAGGTCGGCA GTTCCATTTC GGTGACCTAT GCCAATGCCT ATGCACGCGC CAGCGTGACG
GACCGGCTCT GCCACTACAG TTTTTCCTCG CCGGGCAGCC CGCCGCAGGC CAATCCCGTC
ACGGCCCCGG CGGCCGCGCT GGCGGGGCTG TTCTCGACTG GCAATGGCAT TCCGCCCACT
ACGGCGGTGA CGCTGATGAA CGATGCCAAC CCGTCCGGCG CGATGCGTGA CTTCACGTCG
ATATCGCCCT CGACCAAGCT GGCCGACGGC AATGTCGACG GCGCGCTCTG CCTGCGTGGC
CTGCTGGATA CCCGCAACCC GGCGCTGATG ACCGGTATCG GCCAGACCTA TCGCACGGGC
AACCTTGGCG GCCGACCGTC GGTCATCGTG CAGGGCCGCA GCGATGGCCT GCTGCCGGTG
AACCACACGT CGCGGCCATA TCTCGGGCTG AACAAGCACG TCGAGGGCGC CAGCAGCCGG
CTCTCGTACA TCGAGGTGAC CAACGGCCAG CATTTCGACG GGTTCATCGA CGTGATTCCC
GGATATGCCA AGCGCTATAT CCCGATGCAC GTTTACGTGA ACCGGGCGCT CGACGCGGTC
TACGCCAACC TGCGCGACGG TACGCCGCTG CCGCCGTCGC AGGTGGTGCG CACCACGCCG
CGCGGAGGTG CCGACACCGA CACGGTCGGC CCCAGGATCC AGCCGTCGAA CGTGCCGCCG
ATTGCCGCCA CACCCGCGGC CGGCGACGCG ATCACGGTCA CCGGCTCGAC CGTGGACGTG
CCCAACTGA
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| Protein sequence | MQQRHLSQSA HSHGHGTRRA HRRNTIAIAV ATLAVAACGG FGTNGSGGNT GPNVKPAFIS
GPVGVKSYDG NTDDLLTAGL GKDGLAAAAP AFANPNAPTA VELRRNAIWA NYRAIVDVQA
AGGYGSLYGP NVDAKGNVTT GQGKVPGTEY IAFTDDGSGR QNVTVMAQVP DGFDVKHPCI
ISATSSGSRG VYGGIAVGEW GLKHNCAVAY TDKGTGAAPH DLGSDTVPLI DGTRQTRAGA
GTQAQFAAQP GASETLAGFN SSTPHRLAFK HAHSQQNPEA NWGANTLQAI QFTLWAVNDK
FGRTNTDGMR QATFTPANVL VIASAISNGG GAAIAAAEQD TGGLIDGVAV GEPNVNLPPT
AGVVVKRGGV PVAASGKHLY DYTTIANLYQ LCASQDASLG NAPFAKTAGQ AALNRCASLA
AKKMIAGGST SAQATSALDA LHRAGWEPES DDLFASLSAL EVGSSISVTY ANAYARASVT
DRLCHYSFSS PGSPPQANPV TAPAAALAGL FSTGNGIPPT TAVTLMNDAN PSGAMRDFTS
ISPSTKLADG NVDGALCLRG LLDTRNPALM TGIGQTYRTG NLGGRPSVIV QGRSDGLLPV
NHTSRPYLGL NKHVEGASSR LSYIEVTNGQ HFDGFIDVIP GYAKRYIPMH VYVNRALDAV
YANLRDGTPL PPSQVVRTTP RGGADTDTVG PRIQPSNVPP IAATPAAGDA ITVTGSTVDV
PN
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