| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1912 |
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| Symbol | |
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| ID | 4038716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2081074 |
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| End bp | 2082012 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637977294 |
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| Product | intradiol ring-cleavage dioxygenase |
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| Protein accession | YP_584060 |
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| Protein GI | 94310850 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.806008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACGA TGCAATCTCG ATCGACGCCG CAATCCATTG AAGACCTGGC CCTGATCGAC
GACGAATGGT CGGTGACCGA CGTTGTCAGG CGTGCAATGG AGGGAACGGA GAATCCGCGC
CTGCGCACCG TGATGGCGGC GCTGGTGCGG CATCTGCACG AATTCCTGCG CGAAGTGCGT
CCGACCGACG AGGAGTTTGA GTTAGGGCTC GAGTTCATTG CCGCGCTTGG CCACGCCACG
CACGCCACCA ACAATGAGGT GGTGCTCGCC GCCGACGTGC TGGGCCTGTC GACACTGGTG
ACCACGATGA ACAACAGCAC AGTGGGTGGC CGTACCCCGG GCGCGCTGCT GGGGCCGTTC
TATCGCGCCA ATGCGCCGCG TTACCAGTGC GGCGATTGCG TGGTGCAGGA CGACGCACCG
GGTCTGCCAC TGTTCGTCAG CGGCACCGTG CGTGCGACCG ACGGCACGCC ATTGCGCGGC
GCGACGGTCG AAGTCTGGCA GGCGTCGCCG GTCGGGCTCT ACGACAATCA GGACCCGAAC
CAGCCGGACC GCAATCTGCG CGGACTGTTC CAGACCGATG CGGAAGGCGG CTATCACTTC
CGCACCGTGC GCCCGGCCGG CTATCCTGTG CCCACCAACG GCCCGGTCGG CGAACTGCTG
GCAGCGCAGT TTCGCCATCC GTATCGCCCA GCGCATATCC ATTTCATCGT CGCCGCGCCG
GGCTATCGCA CGCTGGTGAC GCAGGTGTTT GCCGACGACT CCGACATTCT CGAAACCGAT
GTCACGTTCG GCGTGCATCG CCAGCTCGTT GGCCGCTTTC AGCAGGTGGA AGCGGGACGC
AGCCCGTGGG GCGACATACC CGCGCCGTTC TACACGCTGG CATTTGATTT CACGCTGGAA
CCGGGCGTTC AGACGTTCCC GCGTCCGCCG ATCGATTGA
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| Protein sequence | METMQSRSTP QSIEDLALID DEWSVTDVVR RAMEGTENPR LRTVMAALVR HLHEFLREVR
PTDEEFELGL EFIAALGHAT HATNNEVVLA ADVLGLSTLV TTMNNSTVGG RTPGALLGPF
YRANAPRYQC GDCVVQDDAP GLPLFVSGTV RATDGTPLRG ATVEVWQASP VGLYDNQDPN
QPDRNLRGLF QTDAEGGYHF RTVRPAGYPV PTNGPVGELL AAQFRHPYRP AHIHFIVAAP
GYRTLVTQVF ADDSDILETD VTFGVHRQLV GRFQQVEAGR SPWGDIPAPF YTLAFDFTLE
PGVQTFPRPP ID
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