| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1863 |
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| Symbol | |
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| ID | 4038665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 2019748 |
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| End bp | 2021352 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637977243 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_584011 |
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| Protein GI | 94310801 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.856558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.360106 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAC CGTTGCTCAT TTCCTCCATC ATCCGGCACG CTGCGCGCTA CTACGGCAGC
ACCGAAATCG TCTCGCGACG AACCGAAGGC GACCTGCATC GCTATACCTA CCGCGATTGC
GAACTGCGCG CGCGCAAGCT GGCACAGGCG CTTGGCGCGC TGGGCGTGCA GCAGGGCGAA
CGCGTTGGCA CGCTGGCCTG GAACGGCTAT CGCCACCTTG AGATTTACTA CGGCGTGTCC
GGCATGGGCG CCGTCTGTCA TACGATCAAC CCGCGCCTGT TCCCGGAACA GATCGCCTAC
ATCGTCAATC ATGCCGACGA CCAGTACGTG TTCTTCGACA GCACGTTCCT GCCGCTGGTA
GAGGGCGTGG CGCCGCATTG CCCGAACGTG AAGGGCTGGG TGATGATGTC CGACCGCGCC
CACATGCCGG CCGAGTCGAA GGTCGACCTG ATCTGCTACG AAGACCTGAT CGACGCCCAG
GACGGAAACT ACGAGTGGCC GCAGTTCGAC GAAAACCAGG CGTCCAGCCT TTGCTACACG
TCCGGTACCA CGGGCAACCC GAAGGGCGCG CTGTATTCGC ATCGCTCGAC GGTGTTGCAC
TCGTACGCCT CGGCACTGCC CGACGCGCTC GGATGCTCCG CGCGTGACGT GATTCTGCCG
GTCGTGCCGA TGTTCCACGT CAATGCCTGG GGCCTGCCGT ACTCGGTGCC GCTGGTCGGC
GCAAAGCTGG TGCTGCCCGG GCCGAAGCTT GACGGTGCTT CGCTGTTCGA ACTGTTCGAG
CAGGAGGGCG TGACCTTCTC CGCCGGCGTG CCGACGGTCT GGCTGGGCCT GCTGCAATAC
GTCCAGGCCA ACAAGCTGAA GTTCTCGACG TTCCGCCGCA CCGTGATTGG CGGATCGGCG
GCGCCGCCCG CAATGATCCG CGCGCTCGAA GCGCTGGACG TGGAAGTCAT CCACGCATGG
GGCATGACCG AGATGTCGCC GCTGGGCACG TCCTGCAAGC TGCTGGCGCG CCATTTGGAC
CTGCCTGAGG AGGCGCGTCA CAAGATCGTG GAGAAGCAGG GCCGCGTGAT CTATGGCGTC
GACATGAAGA TCGTCGACGG TGAAGGCAAG GAACTGCCGT GGGACGGCAA GGCCTTCGGC
GACCTCTACG TGCGCGGCCC GTGGGTCATC GACCATTACT TCCGCAACGA CAACAGCCCG
CTCGTGGATG GCTGGTTCCC CACCGGGGAC GTGGCCACGA TCGACGAAGA GGGCTACATG
CAGATCACGG ACCGCAGCAA GGACGTGATC AAGTCCGGCG GCGAATGGAT CTCGTCGATT
GATGTCGAGA ACGTCGCTGC CGCGCATCCG GCCGTGCACA TGGCCGCCTG CATCTCCGCG
TATCACCCGA AATGGGACGA GCGACCGCTG CTGGTGGTGG TCAAGCGCCC GAACATGGAG
ATCACGCGCG AGGAACTGCT CGGGTTCTTC GAGGGCAAGG TCGCCAAATG GTGGATTCCC
GACGATGTGC TGTTCGTCAG CGAGATTCCG CTCACGGCTA CCGGCAAGAT GCAGAAGCTC
AAGTTGCGGG AGCAACTCAA GGACTACAAG CTGCCCACCG CCTGA
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| Protein sequence | MSAPLLISSI IRHAARYYGS TEIVSRRTEG DLHRYTYRDC ELRARKLAQA LGALGVQQGE
RVGTLAWNGY RHLEIYYGVS GMGAVCHTIN PRLFPEQIAY IVNHADDQYV FFDSTFLPLV
EGVAPHCPNV KGWVMMSDRA HMPAESKVDL ICYEDLIDAQ DGNYEWPQFD ENQASSLCYT
SGTTGNPKGA LYSHRSTVLH SYASALPDAL GCSARDVILP VVPMFHVNAW GLPYSVPLVG
AKLVLPGPKL DGASLFELFE QEGVTFSAGV PTVWLGLLQY VQANKLKFST FRRTVIGGSA
APPAMIRALE ALDVEVIHAW GMTEMSPLGT SCKLLARHLD LPEEARHKIV EKQGRVIYGV
DMKIVDGEGK ELPWDGKAFG DLYVRGPWVI DHYFRNDNSP LVDGWFPTGD VATIDEEGYM
QITDRSKDVI KSGGEWISSI DVENVAAAHP AVHMAACISA YHPKWDERPL LVVVKRPNME
ITREELLGFF EGKVAKWWIP DDVLFVSEIP LTATGKMQKL KLREQLKDYK LPTA
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