Gene Rmet_1818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1818 
Symbol 
ID4038620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1971990 
End bp1972784 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content68% 
IMG OID637977198 
ProductIclR family transcriptional regulator 
Protein accessionYP_583966 
Protein GI94310756 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0694604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0123424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA CCGACATCCC TCCGGACGAC GCCCGCGACC GCCAGTTCGC CACCACGCTG 
GCCAACGGAC TGGACATCCT GCTGGCCTAT CGGGCAGGCG AATCGCTGCT GGGCAACAAG
GACTTTGTGC AGCGCACCGG GCTGTCGAAG TCGACCGTGG CACGTCTCAC CCACACGCTC
AGCGCGCTCG GCTATCTGCG TCATGACACC GCGCTTGGCA AATACCGGCT GGGTGCACCC
GTGCTGGCGC CGGGCTACCC GCTGCTGGCC AGCATGCCGA TTCGCCAGAT TGCGCGGCCG
CTGATGAAGG CGCTGGCCGA CGAAGTGGGC GGCGCGGTCT CGCTCGGCAT CCGCGACCGG
ACGCAGATGA TATACGTCGA GACCGCGCGC TCGACGGACA ACCTCGTGGT GCCGCCCGAT
ATCGGCGCGG CACTGCCAAT GCTGACGACG GCCATCGGCA AGGCCTGGCT TTGCCGCGCG
CCGGCAGAAC TGCGCGACCC GGTGCTGAAC CGCCTGCGCC TGCAGGACCC CGACGCTTTC
GCACGTGGTG CGCCGGGACT GTCCCAGGCA CGCAAGGACC TCGAGCGGCT GGGCTACTGT
ACGAACCGCG CCGAGTGGCG CCATGACGTG TTCGGCTTTG CCGTTCCTCT GTGCAAGCCC
GTTGACTCGC AGTGGTTCGT GATCAACAGC GGCATCCGGG CGCAGCCGGG CAGATTCCAT
GCGGTCGAGC AGTTTGTCGG CCCCCGGCTG GTGACGCTGG CCCACAACCT CGAAGTGCAG
CTGGGGCTAC GCTGA
 
Protein sequence
MSATDIPPDD ARDRQFATTL ANGLDILLAY RAGESLLGNK DFVQRTGLSK STVARLTHTL 
SALGYLRHDT ALGKYRLGAP VLAPGYPLLA SMPIRQIARP LMKALADEVG GAVSLGIRDR
TQMIYVETAR STDNLVVPPD IGAALPMLTT AIGKAWLCRA PAELRDPVLN RLRLQDPDAF
ARGAPGLSQA RKDLERLGYC TNRAEWRHDV FGFAVPLCKP VDSQWFVINS GIRAQPGRFH
AVEQFVGPRL VTLAHNLEVQ LGLR