| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1809 |
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| Symbol | |
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| ID | 4038611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1961124 |
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| End bp | 1962323 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637977189 |
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| Product | thiamine pyrophosphate enzyme-like TPP-binding |
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| Protein accession | YP_583957 |
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| Protein GI | 94310747 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
[COG4032] Predicted thiamine-pyrophosphate-binding protein |
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| TIGRFAM ID | [TIGR03297] phosphonopyruvate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0361229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.074249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAGG CCGTCCAGTT CGTGGAAGCC GCGCGCGAGC GCGGTTTCGA GTGGTACGCG
GGCGTACCGT GCTCGTACCT GACGCCGTTC ATCAATTACG TGGTGCAGGA CCCTTCCCTG
CATTACGTGT CGGCCGCCAA TGAAGGCGAT GCCGTGGCCT TTATCGCTGG CGTGACGCAG
GGCGCGCGCA ATGGCGTGCG CGGCATCACG ATGATGCAGA ACTCGGGCCT TGGCAACGCG
GTGAGCCCGC TCACCTCGCT GACGTGGACG TTCCGCCTGC CGCAGTTGCT GATCGTCACG
TGGCGCGGAC AACCCGGCGG CGCGTCGGAC GAGCCTCAGC ACGCGCTGAT GGGCCCGGTC
ACGCCTGCCA TGCTCGACAC GATGGAGATC CCGTGGGAGC TGTTCCCGAC CGAGCCTGAT
GCCGTGGGCC CGGCGCTGGA CCGCGCCATC GCCCATATGG ATGCCACCGG CCGGCCGTAC
GCGCTGATCA TGCAGAAGGG CAGCGTGGCG CCCTACCCGC TCAAGACGCA GACGCCACCC
GTGGCGCGCG CGAAGGCAAC GCCGCAAGTG TCGCGTTCCG GCGCCACGCC GCTGCCAAGC
CGCCAGGAAG CGCTGCAACG CGTGATCGCC CACACGCCGG CGGATTCCAC CGTCGTACTG
GCCTCCACCG GCTTCTGCGG TCGTGAACTG TACGCGCTCG ACGATCGTCC CAACCAGCTT
TACATGGTTG GCTCGATGGG CTGCCTGACG CCGTTCGCGC TGGGGCTGGC CATGGCGCGT
CCGGACCTGA AGGTCGTGGC CGTCGACGGC GACGGCGCGG CGCTGATGCG CATGGGCGTG
TTCGCCACGC TCGGCGCGTA TGGCCCGGCC AACCTGACGC ACGTGCTGCT GGATAACAAC
GCACATGATT CGACCGGCGG TCAGGCCACG GTATCGCACA ACGTCTCGTT CGCAGGTGTT
GCCGCGGCGT GCGGCTATGC CTCGGCGATC GAGGGCGACG ATCTCGACAT GCTCGACCGC
GTGCTGGCCA GCGCCGCCAC GGCGACATCG GGCCCGAATT TCGTCTGCCT GCAGACCCGC
GCCGGCACGC CTGACGGGCT GCCGCGTCCG TCGGTGACGC CGGTGGAAGT CAAGACGCGC
CTTGGCCGCC AGATCGGCGC CGACCAGGGC CATGCCGGAG AGAAGCATGC TGCTGCTTAA
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| Protein sequence | MIEAVQFVEA ARERGFEWYA GVPCSYLTPF INYVVQDPSL HYVSAANEGD AVAFIAGVTQ
GARNGVRGIT MMQNSGLGNA VSPLTSLTWT FRLPQLLIVT WRGQPGGASD EPQHALMGPV
TPAMLDTMEI PWELFPTEPD AVGPALDRAI AHMDATGRPY ALIMQKGSVA PYPLKTQTPP
VARAKATPQV SRSGATPLPS RQEALQRVIA HTPADSTVVL ASTGFCGREL YALDDRPNQL
YMVGSMGCLT PFALGLAMAR PDLKVVAVDG DGAALMRMGV FATLGAYGPA NLTHVLLDNN
AHDSTGGQAT VSHNVSFAGV AAACGYASAI EGDDLDMLDR VLASAATATS GPNFVCLQTR
AGTPDGLPRP SVTPVEVKTR LGRQIGADQG HAGEKHAAA
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