Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1803 |
Symbol | |
ID | 4038605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1955967 |
End bp | 1956632 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637977183 |
Product | CDP-alcohol phosphatidyltransferase |
Protein accession | YP_583951 |
Protein GI | 94310741 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.216212 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGA AGACCCATAA ATTCCCGGAT GAACCACCGC TGCCGTCCAC CTGGGACGCG CGCCTTGCCC GCCATCTGGT GCGGCCTCTT AAAGACACCC GCGTTACCCC GAATCACCTG ACCACGTTGC GCCTGATCAT CGGCCTGGCA GGTATCGCCT GCATCGCCCA GGGCAGCTAC GCCTGGACCA ACTTCGGCGC GCTGCTGGTC GTGATTTCGA ACTTCGTCGA CCATACGGAC GGCGAACTGG CCAGAATTAG CGGCAAATCG AGCAAGATCG GACACTTTTA CGATCTGGCG AGCGATGCGC TGATCACCGT GCTGCTGTTC GTCAGCTTCG GCATGGCAGT GGCCGCGCAA GGCGCGGGCG ACGGGCTCGG TTCGGTCTGG CGCGGTACCG TGGCAGGCCT TGCGGTGGCG CTGATCTTCT TCCTGCGGAT GCGTATAGAA TCGCGGGTTG GCAAAAGTGG AACGAAGCAG GCATCGGCCG GCGGTTTCGA GACCGAGGAT GTGCTGTACC TGCTGCCTCT GGTCACACTC GCGGACGGCA TTGAACCGTT CCTGACCGCG GCCTCGATTG GCGCTCCACT GTTTGCCGTC CTTGTCATCA TCGATTACTG GCGAGTCATG CGGCGCCCCC AGCCAGTCGC GACAACCACG GAATAA
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Protein sequence | MNQKTHKFPD EPPLPSTWDA RLARHLVRPL KDTRVTPNHL TTLRLIIGLA GIACIAQGSY AWTNFGALLV VISNFVDHTD GELARISGKS SKIGHFYDLA SDALITVLLF VSFGMAVAAQ GAGDGLGSVW RGTVAGLAVA LIFFLRMRIE SRVGKSGTKQ ASAGGFETED VLYLLPLVTL ADGIEPFLTA ASIGAPLFAV LVIIDYWRVM RRPQPVATTT E
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