| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1786 |
|---|
| Symbol | |
|---|
| ID | 4038588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 1937434 |
|---|
| End bp | 1938429 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637977166 |
|---|
| Product | methane/phenol/toluene hydroxylase |
|---|
| Protein accession | YP_583934 |
|---|
| Protein GI | 94310724 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATCG ATATCCGGAC TGATGCCAGC GTCACTCCGA TCCGGCAGAC CTTCGCGCAT
ATCGCGCGCC GGCTCGGCGC CGACAAGCCG GCCACGCGCT ATCAGGAGGC GATGTACGAC
CTGCAGCCGG TCACGAGCTT CCACTACCGG CCGCTATGGC AGCCGCAATA CGAGCTGTAC
GACGCCCGGC GCACCCGCGT GGTCATGCAG GACTGGTATG CGCTGAAGGA CCCGCGCCAG
TACTTCTACG GCGGCTACGT CAATGCGCGC GCCCGTCAGC AGGAGACGAT GGAGAAGAAC
CTTGAGTTCG TGGACAAGCG CGGGCTGCTG AGCCGGTTGC CCGACGATGT GCGCGAGCTG
CTCACGCTGG GCGTGGTGCC GCTGCGCCAC GTCGAATGGG CGGCCAACAT GAACAACGCG
TCGATTACCG CCTACGGTTT CGGGTCGGCC ATCACGCAGG CCGCGATGTA TCACACGATG
GACCGCCTGG GTATCGCGCA GTACCTGACC CGCATCGGGC TGCTGATCGG CGACAAGGCC
GCCGTGGACC AGGCCCGCGC CGCCTGGATG GAAGACATGG CCTGGCAGCC GCTGCGACAC
GCGGCGGAGG ACCTGTTGGT GCGCGATGAC TGGTTCGAGC AGCACGTGGC GCAGAACCTG
GTGCTCGATG GTCTGATCTA TCCGCTGGTC TACCAGCAGT TCGACGCGCG CCTCTCCGCA
ACCTGGCCCG CGTTTTCGCT CGTGACCGAT TTCATGTCCG CCTGGTACGC CGAGACCACG
CGCTGGGTCG ATGCCACCGT GAAAACGGCC GCACAGGAAA GCCCGGAGAA CGCGGCGGTT
ATCGCTGGGT ACGCCTTCGG CTGGCTCGAT CGCTTCACGC ACGCGCTGCG CCCGCTGGCG
TACCGGCTGT TCGGCGAGGA TGCCGAGTCC GAACTGGCCA ATGCCGTCGA AGCGCTGGGC
AAGCGCCTGA GCGGTCTGGG CCTGGCACGT CAATGA
|
|---|
| Protein sequence | MQIDIRTDAS VTPIRQTFAH IARRLGADKP ATRYQEAMYD LQPVTSFHYR PLWQPQYELY
DARRTRVVMQ DWYALKDPRQ YFYGGYVNAR ARQQETMEKN LEFVDKRGLL SRLPDDVREL
LTLGVVPLRH VEWAANMNNA SITAYGFGSA ITQAAMYHTM DRLGIAQYLT RIGLLIGDKA
AVDQARAAWM EDMAWQPLRH AAEDLLVRDD WFEQHVAQNL VLDGLIYPLV YQQFDARLSA
TWPAFSLVTD FMSAWYAETT RWVDATVKTA AQESPENAAV IAGYAFGWLD RFTHALRPLA
YRLFGEDAES ELANAVEALG KRLSGLGLAR Q
|
|---|
| |