Gene Rmet_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1720 
Symbol 
ID4038523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1862438 
End bp1863370 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content64% 
IMG OID637977102 
ProductIclR family transcriptional regulator 
Protein accessionYP_583870 
Protein GI94310660 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.078554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGGAG ACCGGCTGGC GTCCGATGGC GCGTGTTGGC GTGACGGGTT GTACGAAGTG 
AATCCATTGC AATCCACCCT TCACCGCTGG ACAACCACAA CGGGCGTCCT TGTGCATAAT
GTGCACAACT TAGGTATTAA CCCTGCAACC TACTCTCGCC CTGCTGGTTT CCTTATGCCC
TCGAGCGCCA AAGCGGATGC CCCCCTCCCC CAACCCGGTG TGCAAAGCCT GGCACGCGCC
TTTGCGCTGC TGCACCTGCT GGGCACACAC CACGACCCGG GATTGACCCT GCCCGAGCTT
GCCACGCTGG CGAATATCGA TCGCACTACC GCGCATCGCA TGATCCGTTT CCTTGAGACG
GCGGGATACG CTGAGCGCGA ACCGGCCGGC AAGCGCTATC ACCTGGGCAG CGCGGCCATG
GCGTTGGGCC TGCGGGCAAT GAACCGACCG CCTCCCGATA GCCGTATCGT CACGCGGATG
AAGGCGGTGG CGCGTTTGAC TGGCGACGCG GTGTTCCTGA TTGGGCGTCT AGGCGACCAC
GGACATTGCC TGCACACCGA GGAAGGCGCG CATCGCATCA AGACCTTTGA TCTGTTGACT
GGCACGTCGC GGCTGCTGGG TCAGGGCACG GCGAGCATGG CGCTGATGGC AAGGCTGGAT
AACGACGAAA TCCGGAAGCA CTACAACCGG CATCGGGCGG AGTACGAGCA AGGTGGATTG
AGCCTGCTGG CACTGTTGCG CGGCGTGGAC CGCAGCCGCA AACTCGGTTA TGTGCTGGCC
GGTGCCGGCG GGGTGGCCGG CGTGGGCTAC CTGTTGCCAC TGGCGCTGGA GGGCGACCTG
GCAGTGAGCG TCGTGTCCGC CGCGTCACGG ATGCCCGTTT CGCGACGTCA CGAGATCGGC
GCGTTATTGC AGGCGACATT CGGCGCGGAT TAA
 
Protein sequence
MVGDRLASDG ACWRDGLYEV NPLQSTLHRW TTTTGVLVHN VHNLGINPAT YSRPAGFLMP 
SSAKADAPLP QPGVQSLARA FALLHLLGTH HDPGLTLPEL ATLANIDRTT AHRMIRFLET
AGYAEREPAG KRYHLGSAAM ALGLRAMNRP PPDSRIVTRM KAVARLTGDA VFLIGRLGDH
GHCLHTEEGA HRIKTFDLLT GTSRLLGQGT ASMALMARLD NDEIRKHYNR HRAEYEQGGL
SLLALLRGVD RSRKLGYVLA GAGGVAGVGY LLPLALEGDL AVSVVSAASR MPVSRRHEIG
ALLQATFGAD