| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1711 |
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| Symbol | |
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| ID | 4038514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1853423 |
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| End bp | 1854559 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637977093 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_583861 |
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| Protein GI | 94310651 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.187686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACG CCAGTGATGC GAATGCGCCA GCCACGCCGC CTGCCTCGCC AGGCCCGGCG
GCATCCGGAG ACGCGTCGGG AAAAGGGGTG CGGTGGGTTG TCATCGCGAT CGTGCTCAGT
CTGGTCTGGT ATCTGCTGGC CGACCGCTTC ACGCCTTATA CCCAGCAGGC GCGTGTGCAG
GCGTTCGTGA TTCCAGTGGC TTCAGAAGTG TCTGGCCGCG TCACCCAGGT GCCGGTTCAC
AACAACCAGA ATGTGGAGGT CGGCACCGTG CTGTTCGAGG TCGACCCACA GCAGTACCGG
ATCGCGCTGG ACCGCGCCCG CGCCGATTTC GAATCCACGC GCCGGCAGAT CGGCGCGAAC
ACGGCGGGCA TCGATTCCGC GCGCGAATCG CTGCGAGCGG CGCAGGCCAA CGAGCTCAAG
GCGCGACAGG ACAGCGAGCG GCTTGAGCGT CTGTATCGGG AAGACCCCGG CACGGTTTCC
GTGCGGCGGC TGGAGGTGGC GCGCGCCACG CACACGCAGG CCGTCAGCCA GGTCGGCGCG
GCCCGCGCCG AGGTCGAACG GGCCAAGGAG CAGCAGGGCG GCAGCGAAGA GAACAACGCC
AAGCTGCGCA GCGCCGCTGC GGCGGTTGAA AAGGCGGAGC TCGATCTGTC CAATGCCAAG
ATCCGGGCGC GTACCGGCGG GCTGGTCACC GACCTGCAAA CGGAAGTCGG CCGTTTTGCC
GGCGCCGGCA GCCCGGTCAT GACGCTGATC GCGATCCAGG ATATCTGGAT TACCGCCGAC
CTCACCGAAA ACAACCTGGG CCACGTAGAG CCGGGCACGC CCGTGGCCAT CGTACTCGAC
GCGCTGCCGG GCAAGGTGCT CGAAGGCAAG GTGCGCAGCA TTGGCTACGG CGTGAGCACC
GGCCAGAGCC CGCCACCAGG CAGCCTGCCG ACGGTGCAGA ACAGCCGCGA CTGGCTGCGG
CCCGCGCAAC GCTTTCCGGT GATCGTCGAT ATCGATCCGG GGCAACTCTC TTCGCTGCGC
GGCGTGCGCG TGGGCGGCCA GGCCGAAGTG ATGGCGTTCC CGACCTCAGG CAACCCGCTC
AATCCGTTGG GCCGGCTGTA CATCCGCCTG ATGAGCTGGC TGTCCTATGT CTACTGA
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| Protein sequence | MSDASDANAP ATPPASPGPA ASGDASGKGV RWVVIAIVLS LVWYLLADRF TPYTQQARVQ
AFVIPVASEV SGRVTQVPVH NNQNVEVGTV LFEVDPQQYR IALDRARADF ESTRRQIGAN
TAGIDSARES LRAAQANELK ARQDSERLER LYREDPGTVS VRRLEVARAT HTQAVSQVGA
ARAEVERAKE QQGGSEENNA KLRSAAAAVE KAELDLSNAK IRARTGGLVT DLQTEVGRFA
GAGSPVMTLI AIQDIWITAD LTENNLGHVE PGTPVAIVLD ALPGKVLEGK VRSIGYGVST
GQSPPPGSLP TVQNSRDWLR PAQRFPVIVD IDPGQLSSLR GVRVGGQAEV MAFPTSGNPL
NPLGRLYIRL MSWLSYVY
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