| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1682 |
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| Symbol | |
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| ID | 4038485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1819238 |
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| End bp | 1820473 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637977064 |
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| Product | major facilitator transporter |
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| Protein accession | YP_583832 |
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| Protein GI | 94310622 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000413695 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCTC GATCCTCGCT GCGCCCCGTC TTGCCGATTC TCATCGGCGC GTCAGTCATG
CTGTCCCTTG CCATGGGACT GCGTCAGAGT CTCGGAATCT TCGTGCCGCC GCTGACGCGG
GACATCGGGA TAACGGTGGG CGACTTCACC ATCGCGGTAG CGGTGCAGAA CCTCACCTGG
GGCTTGCTGC AGCCATTCGC CGGCGCGCTG GCGGTCCGGA CCGGTTTTCG TCCGCTGATG
ATGGGGGGAT CGTTGCTGTA CCTCATTGGC CTGGTGTTGC TGGCCACGGC TAATGGCTTG
TGGGCCGTGG TGATTGGTGC TGGTGTGCTG ATTGGCATGG CCATGGCCAC TACTGGCACA
GCCTTGGCCA TGGCCGCGGC GTCGAGCGCG GTCAGTCAGA ACGTGCGAAG CATGATTCTG
GGCCTGGTGT CCGCTTCGGG ATCGATCGGC GCAATGATCG CGGCGCCGCT GGGTCAGGGC
ATCACCGGGG AGTGGGGCTG GCGCATGGGC GTGGCAGCCT TTGCAGTGCT GGCGGTCGTG
ATGTTGCCCG CCGCATGGTT TGCGGGCCGC GCGGACAAGG TGCGGGAAGC GCCGGCGGCG
CGGGCGCAGC CAGAACAGAG CGGCCGCCAG GCCCTGATGA CCGCGCTGCG ACACCCTCCG
TTCGTCGTCA TGGCGCTCGC CTATACGGTA TGCGGCATGC AACTGGTCTT CCTGACCACG
CACCTTCCCG CATATCTGGA AGTCTGCGGC ATGGATCCGA TGTTATCCGC CAAGGCGCTC
GGCCTGATCG GCGGATTCAA TATTCTGGGA AGCCTGTTCT TTGGATGGGC CGGCGGCAGG
GTCAACAAGC TGCTATTGCT GGGTGGCATC TACATCTGCC GATCCATCGG CTTCATCTGG
TTCTTCCATG CCCTGCCGAC ACCAGAAAGC ACGATGATGT TCTCCGCGAT CATGGGCTTT
CTGTGGCTCG GTGTGTCGCC GCTGGTGCAG GGGTGGATTG CCCAGACGTT TGGTCTGCGC
TGGCAGGCAA TGATCGCCGG CGTGGCGTTC TTCAGCCATC AGATCGGCAG TTTCATTGGC
GCCTTCGGTG GCGGCTGGCT CTACGACCAG ATGCAGAGTT ACTCGCTGGC GTGGAAGGTC
GGTGCGTCGC TTGGCTTGAC CCTCGGGCTG ATCCAGGTTG CGTTCGCCTT TGCTTCCAGG
CCGCGGGCGC CACGGCTGGT GCCCGCGGCG GAGTAG
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| Protein sequence | MSSRSSLRPV LPILIGASVM LSLAMGLRQS LGIFVPPLTR DIGITVGDFT IAVAVQNLTW
GLLQPFAGAL AVRTGFRPLM MGGSLLYLIG LVLLATANGL WAVVIGAGVL IGMAMATTGT
ALAMAAASSA VSQNVRSMIL GLVSASGSIG AMIAAPLGQG ITGEWGWRMG VAAFAVLAVV
MLPAAWFAGR ADKVREAPAA RAQPEQSGRQ ALMTALRHPP FVVMALAYTV CGMQLVFLTT
HLPAYLEVCG MDPMLSAKAL GLIGGFNILG SLFFGWAGGR VNKLLLLGGI YICRSIGFIW
FFHALPTPES TMMFSAIMGF LWLGVSPLVQ GWIAQTFGLR WQAMIAGVAF FSHQIGSFIG
AFGGGWLYDQ MQSYSLAWKV GASLGLTLGL IQVAFAFASR PRAPRLVPAA E
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