Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1668 |
Symbol | |
ID | 4038471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1804904 |
End bp | 1805929 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637977050 |
Product | transposase |
Protein accession | YP_583818 |
Protein GI | 94310608 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.892331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATAAAGG AGCTGCCTGC TGGCGTAGCG AAGGTGCTCA AGCGCCTGCA CCATCCGCTG GACGTGATCT TGCTGTGTGT GCGCTGGTAC GTGGCCTATT CGCTGAGCCT GCGTGATCTG GAGGAGATGA TGGCCGAGCG TGGCCTCGCG GTCGATCATT CGATGGTCCA CCGCTGGGTC ATCAAGCTAC TGCCGCTGTT CGAGAAGGCG TTTCGTCGTC ACAAGCGGTC GGTTAGCAAG AGCTGGCGCA TGGACGAGAC CTACCTCAAG GTGCGGGGCA AGTGGGCATA CCTCTATCGT GCCGTGGACA AAGCCGGCAA CACCATCGAC TTCCTGCTGT GTGCCCGCCG TGACAAGGTT GCGGCCCGGC GTTACTTCGA AAAGGCCATC GGCCAGAACG GCGCTCCTGA TACCGTGGCT ATCGACAAAA GCGCGGCCAA CCTGGCCGCG CTGCACGCCG TGAATGCGCA TCGAGAGACG CCCATCAGGA TCCGTCAGCG CAAGTACCTG AACAACATCG TCGAGCAGGA CCATCGGGCC ATCAAACGAC GAGCACGACC CATGCTCGGG TTCAAGAATT TCCGTTGCGC GCGCATCCTT ATCGGCGGCA TCGAAACCAT GCATATGATC GCCAAGGGCA GATGCGGGGA CCCGAAGGCA TTCGCTTGTC CGCCGCGCAG CAATTCCATT CCCTGGTTTC ATAGACCAGC GCACTCCAGC CCACCGGCTT CGACCAACCG GCCTTATCGC GACAGAACCA AGGGCGCAGG TGCTCCAGCC TTTGGAATTC AGACACCATT CGATAGCTCA CGCGGCTCGT TGCTACTGCA ATGGCAGGCC CGCTTAATGA TCTTCGATGC CCTCTCACCC ACTTCCAGAT TTCACTCAGT GCCGGAGGCA ATGCATCTTG GCAAAGTCGT GGTGGATCGC GGCTTCCGCC GCCCGCAAAG CTCATTGAGA GTCGACACCG CTTCATACCG GATCAACCTC GCAGGAGAAA GACATGTATC AAGAACACAC CAATGA
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Protein sequence | MIKELPAGVA KVLKRLHHPL DVILLCVRWY VAYSLSLRDL EEMMAERGLA VDHSMVHRWV IKLLPLFEKA FRRHKRSVSK SWRMDETYLK VRGKWAYLYR AVDKAGNTID FLLCARRDKV AARRYFEKAI GQNGAPDTVA IDKSAANLAA LHAVNAHRET PIRIRQRKYL NNIVEQDHRA IKRRARPMLG FKNFRCARIL IGGIETMHMI AKGRCGDPKA FACPPRSNSI PWFHRPAHSS PPASTNRPYR DRTKGAGAPA FGIQTPFDSS RGSLLLQWQA RLMIFDALSP TSRFHSVPEA MHLGKVVVDR GFRRPQSSLR VDTASYRINL AGERHVSRTH Q
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