Gene Rmet_1567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1567 
Symbol 
ID4038370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1688473 
End bp1689258 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content63% 
IMG OID637976951 
ProductTetR family transcriptional regulator 
Protein accessionYP_583719 
Protein GI94310509 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.865657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATG TTCCCATCGG CAGCGCCAAG GCATCGCCTG AGCGATCAGA TCGATCTGAT 
CGCCAGACAG ATGCGACACC CCCCAAGAAC CGCAGACTCG CCCTGCAAGC CCGCAGCCAG
GCAACAGAGA AAGCGCTGCT GGATGCAGGC CTGGCCCACT TCGAAGCGCA CGGATTCGAG
GGCTTGTCGA TGCAGGCGGT GGCTGAATAC GCTGGCACAT CGATCGGCGC CTTGTACTTC
CGCTTCGGAG ACCGCGAAGG CTTCATTCAG GCCGTGCTGG AGCGCGGCTT CGACCAGATC
CGCCAGGATA CCGACGACTT GCTGGCCAAG GTCACTACCG AGCATGCATC ACCGCACGAA
GTCATCAATG CCTTTGTGGA CCTGGCCGTA CGCGTACAGA AGAAGAGTCA TGGCGTATTC
CGTGCCGTGC TGCAGCGTGC GCTGGTCGAC CCCAAAGCGT GGGAGCCCGT GGGTCGCCTG
GGAAACGACG CCACGCGCCG GCTGGTGTCC GCACTGAGCC GGTTTCCGGA GGTGGTAGCC
ATCCCCGACT GGGAAGCGCG CTTGATGTTC GGCGTGTACG CAGCGCGCAG CGCGCAATTC
AACGCGATGT ACAACAGCCA GGCGCCGCTA CCCAAGGGCC ATGTCGCCAT GGTTCACGTG
TTGTACGAAC TTATCGTGAG CTATCTCGGC CTGCCTCCAA TCGGGCGCGT CGGCCAGGGC
GCTAAGGATC AGGGCGGCCG CCCCAGGAAG CTCGCCACCT CATCGCGTAC CCGCCATACG
CCGTAG
 
Protein sequence
MLDVPIGSAK ASPERSDRSD RQTDATPPKN RRLALQARSQ ATEKALLDAG LAHFEAHGFE 
GLSMQAVAEY AGTSIGALYF RFGDREGFIQ AVLERGFDQI RQDTDDLLAK VTTEHASPHE
VINAFVDLAV RVQKKSHGVF RAVLQRALVD PKAWEPVGRL GNDATRRLVS ALSRFPEVVA
IPDWEARLMF GVYAARSAQF NAMYNSQAPL PKGHVAMVHV LYELIVSYLG LPPIGRVGQG
AKDQGGRPRK LATSSRTRHT P