Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1567 |
Symbol | |
ID | 4038370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 1688473 |
End bp | 1689258 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637976951 |
Product | TetR family transcriptional regulator |
Protein accession | YP_583719 |
Protein GI | 94310509 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.865657 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCGATG TTCCCATCGG CAGCGCCAAG GCATCGCCTG AGCGATCAGA TCGATCTGAT CGCCAGACAG ATGCGACACC CCCCAAGAAC CGCAGACTCG CCCTGCAAGC CCGCAGCCAG GCAACAGAGA AAGCGCTGCT GGATGCAGGC CTGGCCCACT TCGAAGCGCA CGGATTCGAG GGCTTGTCGA TGCAGGCGGT GGCTGAATAC GCTGGCACAT CGATCGGCGC CTTGTACTTC CGCTTCGGAG ACCGCGAAGG CTTCATTCAG GCCGTGCTGG AGCGCGGCTT CGACCAGATC CGCCAGGATA CCGACGACTT GCTGGCCAAG GTCACTACCG AGCATGCATC ACCGCACGAA GTCATCAATG CCTTTGTGGA CCTGGCCGTA CGCGTACAGA AGAAGAGTCA TGGCGTATTC CGTGCCGTGC TGCAGCGTGC GCTGGTCGAC CCCAAAGCGT GGGAGCCCGT GGGTCGCCTG GGAAACGACG CCACGCGCCG GCTGGTGTCC GCACTGAGCC GGTTTCCGGA GGTGGTAGCC ATCCCCGACT GGGAAGCGCG CTTGATGTTC GGCGTGTACG CAGCGCGCAG CGCGCAATTC AACGCGATGT ACAACAGCCA GGCGCCGCTA CCCAAGGGCC ATGTCGCCAT GGTTCACGTG TTGTACGAAC TTATCGTGAG CTATCTCGGC CTGCCTCCAA TCGGGCGCGT CGGCCAGGGC GCTAAGGATC AGGGCGGCCG CCCCAGGAAG CTCGCCACCT CATCGCGTAC CCGCCATACG CCGTAG
|
Protein sequence | MLDVPIGSAK ASPERSDRSD RQTDATPPKN RRLALQARSQ ATEKALLDAG LAHFEAHGFE GLSMQAVAEY AGTSIGALYF RFGDREGFIQ AVLERGFDQI RQDTDDLLAK VTTEHASPHE VINAFVDLAV RVQKKSHGVF RAVLQRALVD PKAWEPVGRL GNDATRRLVS ALSRFPEVVA IPDWEARLMF GVYAARSAQF NAMYNSQAPL PKGHVAMVHV LYELIVSYLG LPPIGRVGQG AKDQGGRPRK LATSSRTRHT P
|
| |