| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1566 |
|---|
| Symbol | |
|---|
| ID | 4038369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 1687539 |
|---|
| End bp | 1688372 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637976950 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_583718 |
|---|
| Protein GI | 94310508 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGTC TGAATGTGGA CGCGCCCGGC ATTCCCAGAA CCAGTGTGCT GGACGCGGGC
CAGGGCAGAG CCACAATTCT GATTCACGGC ACGTCCTCAA GCGCCGAAAT GGGTTGGGCG
CAGTTGCTGC CCAGGCTGGC AGCCAAACGG CGCTGCCTCG CGTTCGACAT GGTCGGCGCA
GGCCAGACCG AAGACCCGGG CGGCCCCATC GCCCTGACCA CGCTGGTCGA GCAGGTCCGC
GCCGTCGCCG ACCTTGCTGG AGACGGCAAG CCTCTGGATC TCATCGGCTA TTCGCTGGGT
GCCGTCGTCG CCGCGGTCGC GGCCGCTGCA ATGCCCGATC GTGTGCGCCG ACTGATCTTG
CTAGGTGGCT GGGTGCAGAG CAGCAGAAGC ATGTGCGTGC TTTTTGACCT CTGGGCGGAG
CTGTCACGAA CCGACAAGCA CCAGCTTGCG AGACTGCTGC TGGTCAACGG CGTGTCCGAT
ACCTTCTTTC AAGCCAACTC CACTGAGGCG ATACAGACCG CACTGGACCG CATCGCCAAC
CTGCTTTCTG CCGGAGGCGA TCGCCAGGCC GAGCTCGATG CCACGATCGA TATTCGCGCC
GAGCTACCCA GGATAAGAGC CCAGACCCTG GTGATCGGTA TGCAACAAGA TCGACTGGTG
CCGCCCGCGC ATTGCCGCGA TCTGGCTGCA GGCATAGCGG GCGCGCGTTA CGAGCAGATC
GACTGCGGCC ACCTCGTCAC GCTGGAACAG CCCGGTGCCC TGCTCGATCT GGTTGAAAGT
CATCTTGATA GTCCGACAGG ACATTGCCAC GAAGAACGAC ACGGTGGCGC ATGA
|
|---|
| Protein sequence | MQRLNVDAPG IPRTSVLDAG QGRATILIHG TSSSAEMGWA QLLPRLAAKR RCLAFDMVGA
GQTEDPGGPI ALTTLVEQVR AVADLAGDGK PLDLIGYSLG AVVAAVAAAA MPDRVRRLIL
LGGWVQSSRS MCVLFDLWAE LSRTDKHQLA RLLLVNGVSD TFFQANSTEA IQTALDRIAN
LLSAGGDRQA ELDATIDIRA ELPRIRAQTL VIGMQQDRLV PPAHCRDLAA GIAGARYEQI
DCGHLVTLEQ PGALLDLVES HLDSPTGHCH EERHGGA
|
|---|
| |