Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1552 |
Symbol | |
ID | 4038355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1674036 |
End bp | 1674308 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637976936 |
Product | putative conjugal transfer trbD transmembrane protein |
Protein accession | YP_583704 |
Protein GI | 94310494 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5268] Type IV secretory pathway, TrbD component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0401164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCCC CGGACACCTT CGCGGACGGT TTCGAGGTGC CGCTGCATCG CTCGCTGACC GAGCCGATTC TGCTGGGCGG TGCGCCGCGC ACCGTGGCGA TCGCCAACGG CACGCTGACC GCCGCTGTCG GCCTGGGCCT GCAACTGTGG ATTCCCGGCG TGGTGCTCTG GATCGTCGGC CATTCGCTGG CGGTGTGGGG TGCGCGCGTC GATCCGCAGT TCATGCAGGT CTTCGCCCGG CACATCAAGC ACCGCCCGCT GCTGGACGTG TGA
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Protein sequence | MSAPDTFADG FEVPLHRSLT EPILLGGAPR TVAIANGTLT AAVGLGLQLW IPGVVLWIVG HSLAVWGARV DPQFMQVFAR HIKHRPLLDV
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