| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1546 |
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| Symbol | |
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| ID | 4038349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1668624 |
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| End bp | 1669604 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637976930 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_583698 |
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| Protein GI | 94310488 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00132043 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.724965 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCAG GGCGCGATTC CCTACGGCGG GCTTGTATGG ATCTTAGGCA TTTTAGGTAC
TTTATTGCCG TAGCCGAAGA GCTGCATTTT GCCCGTGCCG CGGAAAGACT GCATATCGAG
CAATCGCCGC TATCGCGAGC CATAAAAGAA CTAGAAGAAG AGTTGGGGGT GACACTCTTC
TCACGTACCA CGCGCAGCAC TAGATTGACT CGCGCGGGTC AACTTTTTTT GGAGAGCGCA
TACAGGGTGA TGGCTGCCTT TCAACAAGCC CAGGACAGTG TCAAGGCTGT CGCCAACGGC
TTCCAGGGAC AACTGCGCAT TGCGTTATCG GATGGCATCA CACCGTCGCG TCTACCGATA
TTGCTTGCGC TCTGTCGGCA AGAAGAGCCG GAAATTGAAC TCCGGTTTTT TGAGGTGACG
CTTTCGCAAC AGATAAAAGG CCTTCAAGAT GATTTGTATG ACGTCGGCTT CGCGCAGTCC
GATGAAGTCG GCGATGGAAT TGTGGCAATA CCTGTGTGGA GCGATGCGCT TATGGTGGCA
GTGCCGGCCC GACACCCACT TCTGGCTCAC AAGCGAATAC CTTTGGATGA GCTATTGCGC
TATCCGTTGG TCCTCTGCGA TCCGCAGATC TGCGAAGGTC ACGCAAAGCA CGTTGATAGA
GTGTTACGTC AGGCAGACAT GGAGCCGCTG ATTGCTGAAC GAGTTGCTAC TGGCAATTTA
ATGATGGCGC TGGTATCGGC TGGCTTTGCG TTAGCACTGA CGGGCGCGAC TCATATTGCT
GCGAGCCGTG AACCAGGTGT CGTAGCACGA CCACTGGCTT CGCGCGTGCC ACCATTGACG
ACCTACCTGC TTCACACCGA AGGCGAACCC TCAGATGTAT TGGCTCGCTT TATTGAGCGC
GTGCAAGCCA TCGAAGTACC TGATACCCCT CGATCCGCAA TGGGCCACCG CCCCAATCCA
CCCGAGGAAG CTGTGCCATG A
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| Protein sequence | MTSGRDSLRR ACMDLRHFRY FIAVAEELHF ARAAERLHIE QSPLSRAIKE LEEELGVTLF
SRTTRSTRLT RAGQLFLESA YRVMAAFQQA QDSVKAVANG FQGQLRIALS DGITPSRLPI
LLALCRQEEP EIELRFFEVT LSQQIKGLQD DLYDVGFAQS DEVGDGIVAI PVWSDALMVA
VPARHPLLAH KRIPLDELLR YPLVLCDPQI CEGHAKHVDR VLRQADMEPL IAERVATGNL
MMALVSAGFA LALTGATHIA ASREPGVVAR PLASRVPPLT TYLLHTEGEP SDVLARFIER
VQAIEVPDTP RSAMGHRPNP PEEAVP
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