Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1526 |
Symbol | |
ID | 4038329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1648626 |
End bp | 1649132 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637976910 |
Product | HoxW protein |
Protein accession | YP_583678 |
Protein GI | 94310468 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00072] hydrogenase maturation protease |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00000960813 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00380568 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAACGCAC CCGCTGAGTT TCCCCTCGTG ACCCTTGAGG ATTTCGACGA TCCGTCGAGC CTGATTTATG GCATCGGCAA CGTCGGTCGG CAGGACGACG GACTGGGCTG GGCCTTGATC GACTGGCTGG AAGCGGAGTC GCTGTGCCCG AAAGCGGAAA TCCAGAGGCA CTATCAACTG CATCTCGAGG ATGCCGACCT CATCAGCCGC AAGAGGCGGG TGTTGTTTAT CGATGCCACG AAGGACGCCT CGGTGGAATC ATTCACGTTG GAGCGCGCAG AACCGAAAAT GGACTTCAGC TTTACCTCGC ACGCGATCTC GATTCCATCG ATCATGGCGA CCTGTCAACA GTGTTTTCAG CGCTTGCCCG AAGTGTATGT GCTCGCGATC AGGGGGTATG AATGGGAACT CAAAATGGGG TTGACCCAGA GGGCAAGGCA AAACCTGGAC GATGCGACCG CTTATCTCGC GATGCGGCGG AGTGTCGAGT CTCGTGAATT TAGTTAG
|
Protein sequence | MNAPAEFPLV TLEDFDDPSS LIYGIGNVGR QDDGLGWALI DWLEAESLCP KAEIQRHYQL HLEDADLISR KRRVLFIDAT KDASVESFTL ERAEPKMDFS FTSHAISIPS IMATCQQCFQ RLPEVYVLAI RGYEWELKMG LTQRARQNLD DATAYLAMRR SVESREFS
|
| |