| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1490 |
|---|
| Symbol | |
|---|
| ID | 4038293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 1610418 |
|---|
| End bp | 1611011 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637976874 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_583642 |
|---|
| Protein GI | 94310432 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.107689 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0449823 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACACACA GCGCACGTGT TCACGGGACA ATGTCAGGCT GGGTGGGCCA TCTTGCCCCT
GAGCTATCTT TGGACCTCCC TGGCCGGCCG ACGGCCTTCA GGCAAAGTGC CTTATCAGCT
GCAATTCTTG AAAGATTGCC TGGGAGCGGA GTGTCCTCCG CGAGCGACAA ACGTGAGCTT
CGTCTGCTAG AGGCCCTCGT CGATGAGTTG GGTTTGCTCC CGCCCCAGCC TATGTGCTTG
CCGTACCCTA AGACTTCTAG GCTCGCGGAT ATCGCAAGAA AAATTATTGA TGACTTGGCA
GTAGCAAATT CTCTTGACGA CATGGCCGCG CTAGCATTCA TGTCCAGGCG AAGTCTCACG
CGCCAGTTTC GGGCGGAGAC TGGGATGTCA ATCGTGGAGT GGCGTGATGC CGCTCGCATG
CAGCGGGCTG TGCAATTGTT GGCAGCGGGG CATAGCGTGA CCAGCATCGC GTATACGCTC
GGATACGATG GAGCAAGCAG ATTCATAGAT AAATTCAGTG CAACTTTCGG CGTCACACCG
AAGCAGTTCT CCCTTAGATC CATCAGAAAT CCGCTGCGCG AAGATGCTGA TTGA
|
|---|
| Protein sequence | MTHSARVHGT MSGWVGHLAP ELSLDLPGRP TAFRQSALSA AILERLPGSG VSSASDKREL
RLLEALVDEL GLLPPQPMCL PYPKTSRLAD IARKIIDDLA VANSLDDMAA LAFMSRRSLT
RQFRAETGMS IVEWRDAARM QRAVQLLAAG HSVTSIAYTL GYDGASRFID KFSATFGVTP
KQFSLRSIRN PLREDAD
|
|---|
| |