| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1489 |
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| Symbol | |
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| ID | 4038292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1608307 |
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| End bp | 1610409 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637976873 |
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| Product | hypothetical protein |
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| Protein accession | YP_583641 |
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| Protein GI | 94310431 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.685249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0298557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGTGG CGCGGCACGC AGCGGCTTCG CCACCGTGCC GCTTGGGACG CGAGGCCCGC
GCCGATGCGG GCATGTCCGC GTGCTTTGCA CGACCAGACA CGCCGGAGCT TGCAGGGAGC
ACAGCCATGA CCGACCGCCG CGACGACGAT TTCCGCATCC GCCCCGGCGC CCCGAAGAAC
CGGGGCCAGG GCTTCGTCTC CAAGGTGCTC AAGCAGGCGA GCAAGGCCAG CGGCGGCAAG
TCCTCGGTGC GCCGTCCAGG CGGCAGTGGC AAGGGCGCTG GCACTGGCCA GCGGCCCGGC
TCACGCCTGG GGCGCGGCCA CACGGCGGCG CGCTTCGCGG GAGCGAAGCT GACGCCCATG
TCGCGGCGCG TGACCATCAA GACGCTGCTG GTCAACCAGC AGCGGGCCAG CCCGCAGTCG
CTCGCCAAGC ACCTGCGCTA CATCGAGCGC GATGGCGTGG GCCGCGATGG CGAGCCGGGC
CAAGCCTACG GGCCGCAGAC TGATGCCGCC GACCTCGATG CCTTCAAGGA ACGCTGCGCC
GACGACCGGC ACCATTTCCG CTTCATCCTC TCGCCCGAGG ATGGCGCGGA GCTGGAAGAC
CTGCGCACCT ACACGCGCCA CCTGATGGGC CGCATGGAGG CCGACCTGGG GACGCGGCTG
GATTGGGTGG CAGTCGATCA CTGGAACACC GACAACCCGC ACACACACCT GATCGTGCGC
GGGCGCGACG ACACCTGCAA GGACCTCATC ATCGCGGGGG ACTACATCGC CGATGGCTTC
CGTCATCGCG CCGCCGAACT GGCGACCGAA TGGCTGGGGC CACGCACCGA GCTGGAGATC
CAGCAGACCT TGCAGCGCGA GGTGGAGCAG GAGCGATGGA CGAGCCTGGA TCGCACGCTC
AAGCGCGAAC TGGGCGACGA TGGCCTGGTG CATGTCGAAC GGCTCAACGA GCCGAGGTTG
CAACGCCAGC GCCTGCTGCT GGTCGGCCGC CTGCAACGCT TGCAGCGCCT GGGCCTGGCC
GACGAGATGC AGCCGGGCAC CTGGGCCGTC CATTCCAATG CGGAGAAAAC CCTGCGCGCC
CTGGGCGAGC GTGGCGACAT CATCCGCACC ATGCAGCGGG CCATGCGCGG CGAGCCGCGC
GAGCTGGCGG TGTTCGAGCC GGGCGACGAC GGCCGCAGCA TCGTCGGCCG CGTGGCCGCG
AAGGGGCTGA CCGACGAGCT GCGCGACCGC GGCTATCTGG TCATCGACGG TGTGGACGGC
AAGGCCCACT ACGCTGCGCT CAACGCCCGC GACGAACTGG CGAACTATCC CACCGGCGCC
GTGGTGGAGG TGAAGGGATC GGCCGACGTG CGCGCGGCCG ACCGGAACAT TGCCGCACTG
GCGAGCGATG GCCTGTACCG CACCGATCAT CACCTTGCCA TCGCGCAGGG TCAGGCTGTG
CCCGGCCGCG ATCCGCAGGA AGTCGTCGCG GCCCATGTCC GCCGGCTGGA AGCCCTGCGC
CGCGCAGGCA TCGTGGAGCG CGTGGCCGAA GGGCTATGGA AGGTGCCGGA CGACCTGCCC
GAACACGGCC GCCGCTACGA CGCGCAGCGC CTGGGCGGCG TGGCGGTGGA ACTGAAATCG
CACCTGCCCA TCGAGCGGCA GGCCCGCGTG ATCGGGGCCA CCTGGCTCGA CCAGCAACTG
ATCGGCGGCG GCTCGGGCCT GGGCGACCTC GGCTTTGGCG GTGAGGTCAA ACAGGCGATG
CAGCAGCGCG CAGATTTCCT GGCGGAACAG GGGCTAGCCG AGCGGCGCGG GCAGCGCCTG
ATCCTCGCTC GGAACCTGCT GAGCACCTTG CGCAATCGGG AACTGGCGCA GGCCGCGAAG
GACATTGCCG CCGACACCGG CCTGGAGCAT CGGCCCGTGT CCGACGGCCA GCGCGTGGCT
GGCATCTACC GGCGCTCCGT CATGCTCGCC AGCGGACGCT ACGCCATGCT CGATGACGGC
ATGGGGTTCA GCCTGGTGCC GTGGAAACCA ATAATCGAAC AAAGGCTGGG ACAGCAACTC
ACCGCCACCG TGCGCAACGG TGGAGTGTCT TGGGGATTTG GCCGGGAGCG TGGTTTAGCG
TGA
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| Protein sequence | MGVARHAAAS PPCRLGREAR ADAGMSACFA RPDTPELAGS TAMTDRRDDD FRIRPGAPKN
RGQGFVSKVL KQASKASGGK SSVRRPGGSG KGAGTGQRPG SRLGRGHTAA RFAGAKLTPM
SRRVTIKTLL VNQQRASPQS LAKHLRYIER DGVGRDGEPG QAYGPQTDAA DLDAFKERCA
DDRHHFRFIL SPEDGAELED LRTYTRHLMG RMEADLGTRL DWVAVDHWNT DNPHTHLIVR
GRDDTCKDLI IAGDYIADGF RHRAAELATE WLGPRTELEI QQTLQREVEQ ERWTSLDRTL
KRELGDDGLV HVERLNEPRL QRQRLLLVGR LQRLQRLGLA DEMQPGTWAV HSNAEKTLRA
LGERGDIIRT MQRAMRGEPR ELAVFEPGDD GRSIVGRVAA KGLTDELRDR GYLVIDGVDG
KAHYAALNAR DELANYPTGA VVEVKGSADV RAADRNIAAL ASDGLYRTDH HLAIAQGQAV
PGRDPQEVVA AHVRRLEALR RAGIVERVAE GLWKVPDDLP EHGRRYDAQR LGGVAVELKS
HLPIERQARV IGATWLDQQL IGGGSGLGDL GFGGEVKQAM QQRADFLAEQ GLAERRGQRL
ILARNLLSTL RNRELAQAAK DIAADTGLEH RPVSDGQRVA GIYRRSVMLA SGRYAMLDDG
MGFSLVPWKP IIEQRLGQQL TATVRNGGVS WGFGRERGLA
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