Gene Rmet_1454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1454 
Symbol 
ID4038257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1576695 
End bp1577129 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content65% 
IMG OID637976838 
Producthypothetical protein 
Protein accessionYP_583606 
Protein GI94310396 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.348394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCGT ACTACCTTTG GTTTGCCGTT GCGGTCGTGC TGGTGATTGC GGAGCTGGCG 
ACGGGGACCT TCTATTTGCT GATGATCGCC CTCGGGGTTG CCGCAGGCGG TGTGGCTGCG
CTGCTGGGTG CTGACGAGCC AATACAGACG GTCGCCGCCG CGCTGGTTGC GATCATTGGC
ATCGTGTTGT TACGCCGCAC GCGCTTTGGC AAGCTGAGGC GCCGCGACGC CGCATCCAAT
CCGGACGTCA ATCTCGATAT CGGTCAGGAA CTCGAAGTGC CCGCCTGGGA CGATTCCCGT
CGCGCGCGCG TGCCCTACCG CGGCGCGGAT TGGACCGTGG AGCTGGCGCC GGGCGCCGAG
CCGAAACCGG GCCGCTATCG CATTGTCGAA GTGCGTGGTG CCACGTTGAT CGTGGCGCGT
CACTACACGG CCTGA
 
Protein sequence
MTSYYLWFAV AVVLVIAELA TGTFYLLMIA LGVAAGGVAA LLGADEPIQT VAAALVAIIG 
IVLLRRTRFG KLRRRDAASN PDVNLDIGQE LEVPAWDDSR RARVPYRGAD WTVELAPGAE
PKPGRYRIVE VRGATLIVAR HYTA