| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1434 |
|---|
| Symbol | |
|---|
| ID | 4038237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 1555094 |
|---|
| End bp | 1555912 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637976818 |
|---|
| Product | methionine aminopeptidase |
|---|
| Protein accession | YP_583586 |
|---|
| Protein GI | 94310376 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0024] Methionine aminopeptidase |
|---|
| TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000473966 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCC ATATCAACAC CGCCGAAGAC ATCGCCCAAA TGCGCGTGGC TTGCCGCCTT
GCCTCCGAGG TCCTCGACTA CATCACCCCA CACGTGAAGC CCGGCGTCAC CACCGGCGAA
CTCGACCGCC TCTGCCACGC GTATATGCGC GACGTGCAGG GCACCGTGCC GGCGCCGCTG
AACTATGCGC CCCCCGGTTA CCCGCCCTTC CCTGGCGCCA TCTGCACGTC GGTCAACGAC
GTGATCTGCC ACGGCATTCC GGGCGATCGC GTGCTGAAGA GCGGCGACGT GGTGAATCTC
GACATCACCG TGATCACCAA GGAAGGCTAC TACGGCGACA CGAGCCGCAT GTTCGTGGTC
GGCGAGGCGT CGATCCTGGC CAAGCGCCTG TCCCAGATCA CTTACGAATG CATGTGGAAG
GGCATTCAGC AGGTGCGCAA CGGCGCGCGC CTCGGAGACA TCGGTCATGC CATCCAGACC
CATGCCGAGG CCGCCGGCTA TAGCGTGGTG CGCGAATACT GCGGCCACGG CATCGGCAAG
GTCTTCCACT CGGACCCGCA GGTCCTGCAT TACGGCCGTC CAGCCACTGG GATGGAGATC
AAGGCCGGCA TGATCTTCAC GGTCGAGCCG ATGATCAACG CAGGCAAGCG CGATATCCGC
ACGATGCCGG ACCAGTGGAC CGTCAAGACG CGCGACCGCA GCCTGTCGGC CCAATGGGAG
CACACCGTGC TCGTGACCGA AACCGGCTAC GAAGTGCTGA CGCTTTCCGA AGGCTCGCCG
TTGCCGCCTG CGTTCATTAC GGAAACCGTG GCGGCCTGA
|
|---|
| Protein sequence | MSIHINTAED IAQMRVACRL ASEVLDYITP HVKPGVTTGE LDRLCHAYMR DVQGTVPAPL
NYAPPGYPPF PGAICTSVND VICHGIPGDR VLKSGDVVNL DITVITKEGY YGDTSRMFVV
GEASILAKRL SQITYECMWK GIQQVRNGAR LGDIGHAIQT HAEAAGYSVV REYCGHGIGK
VFHSDPQVLH YGRPATGMEI KAGMIFTVEP MINAGKRDIR TMPDQWTVKT RDRSLSAQWE
HTVLVTETGY EVLTLSEGSP LPPAFITETV AA
|
|---|
| |