| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1411 |
|---|
| Symbol | |
|---|
| ID | 4038214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 1524506 |
|---|
| End bp | 1525564 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637976795 |
|---|
| Product | peptidase S58, DmpA |
|---|
| Protein accession | YP_583563 |
|---|
| Protein GI | 94310353 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3191] L-aminopeptidase/D-esterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.704657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0482429 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACCTT CAGCACGCAT TGAACACAAG TCGAGCACGA TGATGGATAT CCCCGTGATT
GGCACGTTGC CGGTGGGCCC TCGCAATGCG ATTACCGACG TGGCTGGCGT GACCGTCGGC
CACTGCACGC TGGCCGACGG GGCTTGCCAG ACCGGGGTGA CGGTGATTCG CCCGCACGCG
GGCAATGTCT ACCGCGAGAA GGTGCCCGCA GCGGCCACCG TGCTGAACGG ATTCGGCAAG
AGCATCGGCC TGGTGCAGGT CGACGAACTC GGCGTGATGG AAACGCCGAT CGCGCTGACC
AACACCTTCT CTGTTGGCGC ACTGGCACAG GCGCAGATCC GCGCGGCCAT TGCCGAGAAC
CCCGAGATCG GCCGCGCCTG GCCCACCGTC AATCCGCTCG TGTTCGAGTG CAATGATGGC
TATCTGAACG ACATTCAGGC GATGGCGGTC CAGGGGATGC ACTACGACAG CGCCCTGGCG
GCCGCGAGCG TGGATGTCGC GCAAGGCGCG GTGGGCGCGG GGCGGGGCAT GTCATCGTTC
GGCGTCAAGG GTGGTATCGG CACCGCATCC CGCATAGCGG GCGGCTACAC GGTTGGCGCG
CTGGTGTTGT CGAACTTCGG CACACCGGAT TCCCTGATCT ACGGCGGCAG GCTGCTGGGC
GCGGCGCTGG CTGGCCAACT GAGGCAGGAG ATCGTCCCGG AGAAGGGATC GATCATCATG
ATCGTGGCCA CCGATGCACC GCTCGACGCG CGGCAGCTTG GCCGGCTTTC GCTGCGCGCC
GGCGCGGGGC TGGCGCGAAC CGGTTCCGTA TTTGGCCATG GCTCTGGCGA TATCGCGCTA
GCGTTCTCGA CGGCGTACAC CGTGCCACAT CTGGCCGACG TACCGATGCC GGCCGTGCAG
ATGGTGCATG AAACACGGCT CGACCCGCTG TTTCGCGCCG CTGCTGACAG CGTGGAGCAG
GCCATCGTCA ATGCGCTCTG GCATGGCGAA ACCGTTCATG GCCGCGATGG GCACACCCGG
CGGGCACTAC GCGAACTGTT GCAGGAACTG ATGGCATGA
|
|---|
| Protein sequence | MAPSARIEHK SSTMMDIPVI GTLPVGPRNA ITDVAGVTVG HCTLADGACQ TGVTVIRPHA
GNVYREKVPA AATVLNGFGK SIGLVQVDEL GVMETPIALT NTFSVGALAQ AQIRAAIAEN
PEIGRAWPTV NPLVFECNDG YLNDIQAMAV QGMHYDSALA AASVDVAQGA VGAGRGMSSF
GVKGGIGTAS RIAGGYTVGA LVLSNFGTPD SLIYGGRLLG AALAGQLRQE IVPEKGSIIM
IVATDAPLDA RQLGRLSLRA GAGLARTGSV FGHGSGDIAL AFSTAYTVPH LADVPMPAVQ
MVHETRLDPL FRAAADSVEQ AIVNALWHGE TVHGRDGHTR RALRELLQEL MA
|
|---|
| |