Gene Rmet_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1406 
Symbol 
ID4038209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1518009 
End bp1518977 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content69% 
IMG OID637976790 
Productasparaginase 
Protein accessionYP_583558 
Protein GI94310348 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1446] Asparaginase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0225592 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0880734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCAAG CTGTTATCGC CATCCACGGT GGCGCGGGCA CGATCACCCG TGCCGCGATG 
AATGCAGAGC GCGAACGCGA GTACGCCGCC GCGCTCGAGC AGGTACTGCT CGCTGGCCAG
CGCGTGCTGG CCGACGGCGG CAGCGCGCTC GACGCGGTCA CCGAAGCGGT GCGCCTGCTC
GAAGACAGTC CGCTGTTCAA CGCCGGCCGG GGTGCCGTGC TGACCCATGC AGGCACTTTC
GAACTCGACG CGGCAATCAT GGATGGCCAG ACGCTGGGCG CCGGCGCCGT GGCCTGCGTC
AAGCGCTTGC GCAACCCCGT GCTGGCCGCG CGTGCCGTGC TGGAACGCAG CGAGCATGTG
CTGTTTGCCG CCGAGGGCGC CGAGGCGTTT GCCGAAGCCC AGGGGCTGGA ACTGGTCGGG
CCCGAGTACT ACTTCACGCA GGCCCGCCAC GATCAATGGG TGCGTGCGCA AGCCAGTACC
GGCATGGCGC TGCTCGACCA TGACGCGGCT GCACTGGCCG CCAGGGCGGG GGCTGCCGAT
CCGATCGATC CCGACAACAA GTTCGGCACG GTTGGCGCGG TGGCCTGCGA TGCCGCTGGC
AACCTCGCCG CGGCCACGTC GACCGGCGGC GTGACCAACA AGCAGGTGGG CCGCGTGGGC
GATACCCCGA TCGTTGGGGC CGGCTGCTAC GCGGACGATG TCGCGGCAGT CTCGGCCACG
GGCACGGGCG AGATGTTCAT CCGCACCGTG GCCGCGTTCG ACGTCTCGGC GCAAATGCGC
TACGCCGGGC TGTCGCTCGA GGAATCGGCG CGCCGCGTGG TGATGGAAAA GCTTCCCGCG
ATTGGCGGCC GTGGCGGCCT GATCGCGGTG GACCGTGCCG GCAACGTCAC GCTACCGTTC
AACACGGAAG GCATGTACCG AGGCGTGGCA CGCGTTGGCG AGCCGGCCAC TGTCTGGATC
TACGGCTGA
 
Protein sequence
MPQAVIAIHG GAGTITRAAM NAEREREYAA ALEQVLLAGQ RVLADGGSAL DAVTEAVRLL 
EDSPLFNAGR GAVLTHAGTF ELDAAIMDGQ TLGAGAVACV KRLRNPVLAA RAVLERSEHV
LFAAEGAEAF AEAQGLELVG PEYYFTQARH DQWVRAQAST GMALLDHDAA ALAARAGAAD
PIDPDNKFGT VGAVACDAAG NLAAATSTGG VTNKQVGRVG DTPIVGAGCY ADDVAAVSAT
GTGEMFIRTV AAFDVSAQMR YAGLSLEESA RRVVMEKLPA IGGRGGLIAV DRAGNVTLPF
NTEGMYRGVA RVGEPATVWI YG