| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1402 |
|---|
| Symbol | |
|---|
| ID | 4038205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | - |
|---|
| Start bp | 1511889 |
|---|
| End bp | 1513985 |
|---|
| Gene Length | 2097 bp |
|---|
| Protein Length | 698 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637976786 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_583554 |
|---|
| Protein GI | 94310344 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.863964 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.205205 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGATTC AAGAGACGTT GCGCGGGCGT GGTTCGCGCA TCTGGACGCC CGTGCTCGGC
GTCATGACGG TTGCGGTGAT GGCGGCATGT GGTGGTGGCG GCGATAGCGG CAGCAACGGT
GGCAGCAATG GCGGCGGCAG CCAGCCAGCC GCAACGGTGC AAGGCACTGC GGCATCCGGT
GCATTCATGG GCGGCGCGCA GGTCACCATG TTCGATGCCG ATGGCAAGAC CGTCGGCATC
CGCGTCGCCG ACGCTAACGG ACGGTACAGC TTCGACGTAT CCGGCTTCCG CGCGCCGTTC
GCCCTGCAGG CAACCGGCAC GGCCGGTGGC GAGACCGTGA CCTATGTGTC CGTGCTGCCG
ACCAAACCCG CGAGCGGCTC CACGGTCACG GCCAACGTGA CGCCATTGAC TACCGCGCTT
GCGGCATTGT TGGCCGGCGG CAATCCGGCC GACCTGACCG GCGCCAGCGC GCTCAACAGC
AAGGTCAGCA GCGCCGGCGT GCAGCAAGCC ACGGCCGCCC TGCGTGCCGT GCTGGCCAAT
GTCGCTACCA GCGCCGGAAT GAACGCCGGA AGCTTCGACC CGATTTCCAC CCCGCTCACC
ACCGAGGGCC AGGGCGCCGA CGCGGTCATC GACCTTGTCC ACGTGACCCT GACCGCCAAC
GGCGTCAAGC TGGCATCCCG GGGGGCGCAA CTCACGGGCG GTTCCATTCC GGAAGCCGTG
CTCGACGCCA ACGCATTGAC CAAGCCGCCC GCCGCACTGC CGACGCCGAC GGCCTCCACC
AATGCCCGCA CCTTCGAAGC GATCCGCGCG AACCTGCAAG CCTGCTTCGC CGCCGCCCCG
TCCGCACGTG CCAGCGCCAC CGCGCTGCTC ACGGCGTGCG CACCGGCATT CGCCAGCGAC
TATCTGAACA ACAGCTATTC GGCGGCCGTC GATTTCTCTG CCCTGTTCTC GTCGACCGAC
ATGAACGGCG CCGTCTTCCG GGCCCCGATC GTGTTGTTCA ACGGTAAGGC CGATAGCGGC
GAGGCCACGG CATTCGTGCG CTTCCCGTTC GTGCGTGCCG ACGGCAGCAC GTCGCAGTTC
ACCCGCCGCG TGACCAACCG CGCCGGCACG TGGACGATGA CCGGCAACCA GCGCCAGTAC
GAAGCTGCCG TCACGCGCCG CATCAGCAAG GTGATCGAGC GCAATACGGG TGCAGGCATT
GCTTCGCGGT ATGAAACCAG TCTGCGCGTG TTGCTGAATC CGCAGACCGG CCTCGGCATC
AAGGCGCAGC TCGTACGCGT CACGGGCCCC GGCCTGCCCA GTGCGGGTGT CGTGCTGGCC
CGTTCGCGCG TATGCGGCTC AAGCGCCAAC CTCGTGATCC AGAACCTGAA CGGCTCGCTG
ACGTATGCCG CCAACGACCC CGTGGCGCCC AACGCGGTCA TCAGCAGTTC AGGGCAGTCC
AGCAGCACCG TGGTGCTGGC CGCGACGCCG CTGAAAGCTG GAGACGCGCT GACCTGGTCG
TCGCTGAGTT CGGGCGCCAA CACCTATGCG TCGGCGCCGC TGTCCGACAA CGACATCACC
GCGATCCCGA CCTTCGCCAG CTACACGTTC GACGTCTGGT ATCTGAACAA CGATCTGTCC
TACAAGACCG CTCTGCCGGC CACGCCAGAC GACTCGTTCA CCGTGACGTC GTCGGGCGGC
GTGCTGATGC CGTCTGTCAT CGCGCGCCAG ACCTGGAACG AGATCGCGGA AGGCAGTCTC
GATTTCGTGA CGACGGGCGG CGGCAAGACC GGCGCCCAGA CCACGGTCGA TGTGAACTGG
ACACAGAACG CCGAGCCCGT GGACCGCGCC CTCGCCTTCG GCCGCCAGTT CGCCGCCGCA
GTTGCGCCCG CGCCCGCAGC AGGCGATCGC ACGTTCATCC AGACCAACGT GCCGTCGTAC
CTGCAGCGCT CCGTCACGGT CAGCACCGCC AAGCAGGGCT CCAGCGCGTT CGTTAGCTGC
AACGGCGCTA CGTTCCCGGC CTTCGCTTCG GCCGGAGACC AGCGCACCGT CGAAATCCGC
TCGACCACGG GCGACGATAC CCAGAAGTTC GTGCGGGTGG TGGGTACCTA CCGCTGA
|
|---|
| Protein sequence | MGIQETLRGR GSRIWTPVLG VMTVAVMAAC GGGGDSGSNG GSNGGGSQPA ATVQGTAASG
AFMGGAQVTM FDADGKTVGI RVADANGRYS FDVSGFRAPF ALQATGTAGG ETVTYVSVLP
TKPASGSTVT ANVTPLTTAL AALLAGGNPA DLTGASALNS KVSSAGVQQA TAALRAVLAN
VATSAGMNAG SFDPISTPLT TEGQGADAVI DLVHVTLTAN GVKLASRGAQ LTGGSIPEAV
LDANALTKPP AALPTPTAST NARTFEAIRA NLQACFAAAP SARASATALL TACAPAFASD
YLNNSYSAAV DFSALFSSTD MNGAVFRAPI VLFNGKADSG EATAFVRFPF VRADGSTSQF
TRRVTNRAGT WTMTGNQRQY EAAVTRRISK VIERNTGAGI ASRYETSLRV LLNPQTGLGI
KAQLVRVTGP GLPSAGVVLA RSRVCGSSAN LVIQNLNGSL TYAANDPVAP NAVISSSGQS
SSTVVLAATP LKAGDALTWS SLSSGANTYA SAPLSDNDIT AIPTFASYTF DVWYLNNDLS
YKTALPATPD DSFTVTSSGG VLMPSVIARQ TWNEIAEGSL DFVTTGGGKT GAQTTVDVNW
TQNAEPVDRA LAFGRQFAAA VAPAPAAGDR TFIQTNVPSY LQRSVTVSTA KQGSSAFVSC
NGATFPAFAS AGDQRTVEIR STTGDDTQKF VRVVGTYR
|
|---|
| |